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yap-6.3/packages/CLPBN/clpbn/bp/BPSolver.cpp

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#include <cstdlib>
#include <limits>
#include <time.h>
#include <iostream>
#include <sstream>
#include <iomanip>
#include "BPSolver.h"
BPSolver::BPSolver (const BayesNet& bn) : Solver (&bn)
{
bn_ = &bn;
useAlwaysLoopySolver_ = false;
//jointCalcType_ = CHAIN_RULE;
jointCalcType_ = JUNCTION_NODE;
}
BPSolver::~BPSolver (void)
{
for (unsigned i = 0; i < nodesI_.size(); i++) {
delete nodesI_[i];
}
for (unsigned i = 0; i < links_.size(); i++) {
delete links_[i];
}
}
void
BPSolver::runSolver (void)
{
clock_t start_ = clock();
unsigned size = bn_->getNumberOfNodes();
unsigned nIters = 0;
initializeSolver();
if (bn_->isSingleConnected() && !useAlwaysLoopySolver_) {
runPolyTreeSolver();
Statistics::numSolvedPolyTrees ++;
} else {
runLoopySolver();
Statistics::numSolvedLoopyNets ++;
if (nIter_ >= SolverOptions::maxIter) {
Statistics::numUnconvergedRuns ++;
} else {
nIters = nIter_;
}
if (DL >= 2) {
cout << endl;
if (nIter_ < SolverOptions::maxIter) {
cout << "Belief propagation converged in " ;
cout << nIter_ << " iterations" << endl;
} else {
cout << "The maximum number of iterations was hit, terminating..." ;
cout << endl;
}
}
}
double time = (double (clock() - start_)) / CLOCKS_PER_SEC;
Statistics::updateStats (size, nIters, time);
if (EXPORT_TO_DOT && size > EXPORT_MIN_SIZE) {
stringstream ss;
ss << size << "." ;
ss << Statistics::getCounting (size) << ".dot" ;
bn_->exportToDotFormat (ss.str().c_str());
}
}
ParamSet
BPSolver::getPosterioriOf (Vid vid) const
{
BayesNode* node = bn_->getBayesNode (vid);
assert (node);
return nodesI_[node->getIndex()]->getBeliefs();
}
ParamSet
BPSolver::getJointDistributionOf (const VidSet& jointVids)
{
if (DL >= 2) {
cout << "calculating joint distribution on: " ;
for (unsigned i = 0; i < jointVids.size(); i++) {
Variable* var = bn_->getBayesNode (jointVids[i]);
cout << var->getLabel() << " " ;
}
cout << endl;
}
if (jointCalcType_ == JUNCTION_NODE) {
return getJointByJunctionNode (jointVids);
} else {
return getJointByChainRule (jointVids);
}
}
void
BPSolver::initializeSolver (void)
{
if (DL >= 2) {
if (!useAlwaysLoopySolver_) {
cout << "-> solver type = polytree solver" << endl;
cout << "-> schedule = n/a";
} else {
cout << "-> solver = loopy solver" << endl;
cout << "-> schedule = ";
switch (SolverOptions::schedule) {
case SolverOptions::S_SEQ_FIXED: cout << "sequential fixed" ; break;
case SolverOptions::S_SEQ_RANDOM: cout << "sequential random" ; break;
case SolverOptions::S_PARALLEL: cout << "parallel" ; break;
case SolverOptions::S_MAX_RESIDUAL: cout << "max residual" ; break;
}
}
cout << endl;
cout << "-> joint method = " ;
if (jointCalcType_ == JUNCTION_NODE) {
cout << "junction node" << endl;
} else {
cout << "chain rule " << endl;
}
cout << "-> max iters = " << SolverOptions::maxIter << endl;
cout << "-> accuracy = " << SolverOptions::accuracy << endl;
cout << endl;
}
CBnNodeSet nodes = bn_->getBayesNodes();
for (unsigned i = 0; i < nodesI_.size(); i++) {
delete nodesI_[i];
}
nodesI_.clear();
nodesI_.reserve (nodes.size());
links_.clear();
sortedOrder_.clear();
edgeMap_.clear();
for (unsigned i = 0; i < nodes.size(); i++) {
nodesI_.push_back (new BPNodeInfo (nodes[i]));
}
BnNodeSet roots = bn_->getRootNodes();
for (unsigned i = 0; i < roots.size(); i++) {
const ParamSet& params = roots[i]->getParameters();
ParamSet& piVals = M(roots[i])->getPiValues();
for (unsigned ri = 0; ri < roots[i]->getDomainSize(); ri++) {
piVals[ri] = params[ri];
}
}
for (unsigned i = 0; i < nodes.size(); i++) {
CBnNodeSet parents = nodes[i]->getParents();
for (unsigned j = 0; j < parents.size(); j++) {
Edge* newLink = new Edge (parents[j], nodes[i], PI_MSG);
links_.push_back (newLink);
M(nodes[i])->addIncomingParentLink (newLink);
M(parents[j])->addOutcomingChildLink (newLink);
}
CBnNodeSet childs = nodes[i]->getChilds();
for (unsigned j = 0; j < childs.size(); j++) {
Edge* newLink = new Edge (childs[j], nodes[i], LAMBDA_MSG);
links_.push_back (newLink);
M(nodes[i])->addIncomingChildLink (newLink);
M(childs[j])->addOutcomingParentLink (newLink);
}
}
for (unsigned i = 0; i < nodes.size(); i++) {
if (nodes[i]->hasEvidence()) {
ParamSet& piVals = M(nodes[i])->getPiValues();
ParamSet& ldVals = M(nodes[i])->getLambdaValues();
for (unsigned xi = 0; xi < nodes[i]->getDomainSize(); xi++) {
piVals[xi] = 0.0;
ldVals[xi] = 0.0;
}
piVals[nodes[i]->getEvidence()] = 1.0;
ldVals[nodes[i]->getEvidence()] = 1.0;
}
}
}
void
BPSolver::runPolyTreeSolver (void)
{
CBnNodeSet nodes = bn_->getBayesNodes();
for (unsigned i = 0; i < nodes.size(); i++) {
if (nodes[i]->isRoot()) {
M(nodes[i])->markPiValuesAsCalculated();
}
if (nodes[i]->isLeaf()) {
M(nodes[i])->markLambdaValuesAsCalculated();
}
}
bool finish = false;
while (!finish) {
finish = true;
for (unsigned i = 0; i < nodes.size(); i++) {
if (M(nodes[i])->arePiValuesCalculated() == false
&& M(nodes[i])->receivedAllPiMessages()) {
if (!nodes[i]->hasEvidence()) {
updatePiValues (nodes[i]);
}
M(nodes[i])->markPiValuesAsCalculated();
finish = false;
}
if (M(nodes[i])->areLambdaValuesCalculated() == false
&& M(nodes[i])->receivedAllLambdaMessages()) {
if (!nodes[i]->hasEvidence()) {
updateLambdaValues (nodes[i]);
}
M(nodes[i])->markLambdaValuesAsCalculated();
finish = false;
}
if (M(nodes[i])->arePiValuesCalculated()) {
CEdgeSet outChildLinks = M(nodes[i])->getOutcomingChildLinks();
for (unsigned j = 0; j < outChildLinks.size(); j++) {
BayesNode* child = outChildLinks[j]->getDestination();
if (!outChildLinks[j]->messageWasSended()) {
if (M(nodes[i])->readyToSendPiMsgTo (child)) {
outChildLinks[j]->setNextMessage (getMessage (outChildLinks[j]));
outChildLinks[j]->updateMessage();
M(child)->incNumPiMsgsRcv();
}
finish = false;
}
}
}
if (M(nodes[i])->areLambdaValuesCalculated()) {
CEdgeSet outParentLinks = M(nodes[i])->getOutcomingParentLinks();
for (unsigned j = 0; j < outParentLinks.size(); j++) {
BayesNode* parent = outParentLinks[j]->getDestination();
if (!outParentLinks[j]->messageWasSended()) {
if (M(nodes[i])->readyToSendLambdaMsgTo (parent)) {
outParentLinks[j]->setNextMessage (getMessage (outParentLinks[j]));
outParentLinks[j]->updateMessage();
M(parent)->incNumLambdaMsgsRcv();
}
finish = false;
}
}
}
}
}
}
void
BPSolver::runLoopySolver()
{
nIter_ = 0;
while (!converged() && nIter_ < SolverOptions::maxIter) {
nIter_++;
if (DL >= 2) {
cout << endl;
cout << "****************************************" ;
cout << "****************************************" ;
cout << endl;
cout << " Iteration " << nIter_ << endl;
cout << "****************************************" ;
cout << "****************************************" ;
cout << endl;
}
switch (SolverOptions::schedule) {
case SolverOptions::S_SEQ_RANDOM:
random_shuffle (links_.begin(), links_.end());
// no break
case SolverOptions::S_SEQ_FIXED:
for (unsigned i = 0; i < links_.size(); i++) {
links_[i]->setNextMessage (getMessage (links_[i]));
links_[i]->updateMessage();
updateValues (links_[i]);
}
break;
case SolverOptions::S_PARALLEL:
for (unsigned i = 0; i < links_.size(); i++) {
//calculateNextMessage (links_[i]);
}
for (unsigned i = 0; i < links_.size(); i++) {
//updateMessage (links_[i]);
//updateValues (links_[i]);
}
break;
case SolverOptions::S_MAX_RESIDUAL:
maxResidualSchedule();
break;
}
}
}
bool
BPSolver::converged (void) const
{
// this can happen if the graph is fully disconnected
if (links_.size() == 0) {
return true;
}
if (nIter_ == 0 || nIter_ == 1) {
return false;
}
bool converged = true;
if (SolverOptions::schedule == SolverOptions::S_MAX_RESIDUAL) {
Param maxResidual = (*(sortedOrder_.begin()))->getResidual();
if (maxResidual < SolverOptions::accuracy) {
converged = true;
} else {
converged = false;
}
} else {
CBnNodeSet nodes = bn_->getBayesNodes();
for (unsigned i = 0; i < nodes.size(); i++) {
if (!nodes[i]->hasEvidence()) {
double change = M(nodes[i])->getBeliefChange();
if (DL >= 2) {
cout << nodes[i]->getLabel() + " belief change = " ;
cout << change << endl;
}
if (change > SolverOptions::accuracy) {
converged = false;
if (DL == 0) break;
}
}
}
}
return converged;
}
void
BPSolver::maxResidualSchedule (void)
{
if (nIter_ == 1) {
for (unsigned i = 0; i < links_.size(); i++) {
links_[i]->setNextMessage (getMessage (links_[i]));
links_[i]->updateResidual();
SortedOrder::iterator it = sortedOrder_.insert (links_[i]);
edgeMap_.insert (make_pair (links_[i], it));
if (DL >= 2) {
cout << "calculating " << links_[i]->toString() << endl;
}
}
return;
}
for (unsigned c = 0; c < sortedOrder_.size(); c++) {
if (DL >= 2) {
cout << endl << "current residuals:" << endl;
for (SortedOrder::iterator it = sortedOrder_.begin();
it != sortedOrder_.end(); it ++) {
cout << " " << setw (30) << left << (*it)->toString();
cout << "residual = " << (*it)->getResidual() << endl;
}
}
SortedOrder::iterator it = sortedOrder_.begin();
Edge* edge = *it;
if (DL >= 2) {
cout << "updating " << edge->toString() << endl;
}
if (edge->getResidual() < SolverOptions::accuracy) {
return;
}
edge->updateMessage();
updateValues (edge);
edge->clearResidual();
sortedOrder_.erase (it);
edgeMap_.find (edge)->second = sortedOrder_.insert (edge);
// update the messages that depend on message source --> destin
CEdgeSet outChildLinks =
M(edge->getDestination())->getOutcomingChildLinks();
for (unsigned i = 0; i < outChildLinks.size(); i++) {
if (outChildLinks[i]->getDestination() != edge->getSource()) {
if (DL >= 2) {
cout << " calculating " << outChildLinks[i]->toString() << endl;
}
outChildLinks[i]->setNextMessage (getMessage (outChildLinks[i]));
outChildLinks[i]->updateResidual();
EdgeMap::iterator iter = edgeMap_.find (outChildLinks[i]);
sortedOrder_.erase (iter->second);
iter->second = sortedOrder_.insert (outChildLinks[i]);
}
}
CEdgeSet outParentLinks =
M(edge->getDestination())->getOutcomingParentLinks();
for (unsigned i = 0; i < outParentLinks.size(); i++) {
if (outParentLinks[i]->getDestination() != edge->getSource()) {
//&& !outParentLinks[i]->getDestination()->hasEvidence()) FIXME{
if (DL >= 2) {
cout << " calculating " << outParentLinks[i]->toString() << endl;
}
outParentLinks[i]->setNextMessage (getMessage (outParentLinks[i]));
outParentLinks[i]->updateResidual();
EdgeMap::iterator iter = edgeMap_.find (outParentLinks[i]);
sortedOrder_.erase (iter->second);
iter->second = sortedOrder_.insert (outParentLinks[i]);
}
}
}
}
void
BPSolver::updatePiValues (BayesNode* x)
{
// π(Xi)
if (DL >= 3) {
cout << "updating " << PI << " values for " << x->getLabel() << endl;
}
CEdgeSet parentLinks = M(x)->getIncomingParentLinks();
assert (x->getParents() == parentLinks.size());
const vector<CptEntry>& entries = x->getCptEntries();
stringstream* calcs1 = 0;
stringstream* calcs2 = 0;
ParamSet messageProducts (entries.size());
for (unsigned k = 0; k < entries.size(); k++) {
if (DL >= 5) {
calcs1 = new stringstream;
calcs2 = new stringstream;
}
double messageProduct = 1.0;
const DConf& conf = entries[k].getDomainConfiguration();
for (unsigned i = 0; i < parentLinks.size(); i++) {
assert (parentLinks[i]->getSource() == parents[i]);
assert (parentLinks[i]->getDestination() == x);
messageProduct *= parentLinks[i]->getMessage()[conf[i]];
if (DL >= 5) {
if (i != 0) *calcs1 << "." ;
if (i != 0) *calcs2 << "*" ;
*calcs1 << PI << "(" << parentLinks[i]->getSource()->getLabel();
*calcs1 << " --> " << x->getLabel() << ")" ;
*calcs1 << "[" ;
*calcs1 << parentLinks[i]->getSource()->getDomain()[conf[i]];
*calcs1 << "]";
*calcs2 << parentLinks[i]->getMessage()[conf[i]];
}
}
messageProducts[k] = messageProduct;
if (DL >= 5) {
cout << " mp" << k;
cout << " = " << (*calcs1).str();
if (parentLinks.size() == 1) {
cout << " = " << messageProduct << endl;
} else {
cout << " = " << (*calcs2).str();
cout << " = " << messageProduct << endl;
}
delete calcs1;
delete calcs2;
}
}
for (unsigned xi = 0; xi < x->getDomainSize(); xi++) {
double sum = 0.0;
if (DL >= 5) {
calcs1 = new stringstream;
calcs2 = new stringstream;
}
for (unsigned k = 0; k < entries.size(); k++) {
sum += x->getProbability (xi, entries[k]) * messageProducts[k];
if (DL >= 5) {
if (k != 0) *calcs1 << " + " ;
if (k != 0) *calcs2 << " + " ;
*calcs1 << x->cptEntryToString (xi, entries[k]);
*calcs1 << ".mp" << k;
*calcs2 << x->getProbability (xi, entries[k]);
*calcs2 << "*" << messageProducts[k];
}
}
M(x)->setPiValue (xi, sum);
if (DL >= 5) {
cout << " " << PI << "(" << x->getLabel() << ")" ;
cout << "[" << x->getDomain()[xi] << "]" ;
cout << " = " << (*calcs1).str();
cout << " = " << (*calcs2).str();
cout << " = " << sum << endl;
delete calcs1;
delete calcs2;
}
}
}
void
BPSolver::updateLambdaValues (BayesNode* x)
{
// λ(Xi)
if (DL >= 3) {
cout << "updating " << LD << " values for " << x->getLabel() << endl;
}
CEdgeSet childLinks = M(x)->getIncomingChildLinks();
stringstream* calcs1 = 0;
stringstream* calcs2 = 0;
for (unsigned xi = 0; xi < x->getDomainSize(); xi++) {
double product = 1.0;
if (DL >= 5) {
calcs1 = new stringstream;
calcs2 = new stringstream;
}
for (unsigned i = 0; i < childLinks.size(); i++) {
assert (childLinks[i]->getDestination() == x);
product *= childLinks[i]->getMessage()[xi];
if (DL >= 5) {
if (i != 0) *calcs1 << "." ;
if (i != 0) *calcs2 << "*" ;
*calcs1 << LD << "(" << childLinks[i]->getSource()->getLabel();
*calcs1 << "-->" << x->getLabel() << ")" ;
*calcs1 << "[" << x->getDomain()[xi] << "]" ;
*calcs2 << childLinks[i]->getMessage()[xi];
}
}
M(x)->setLambdaValue (xi, product);
if (DL >= 5) {
cout << " " << LD << "(" << x->getLabel() << ")" ;
cout << "[" << x->getDomain()[xi] << "]" ;
cout << " = " << (*calcs1).str();
if (childLinks.size() == 1) {
cout << " = " << product << endl;
} else {
cout << " = " << (*calcs2).str();
cout << " = " << product << endl;
}
delete calcs1;
delete calcs2;
}
}
}
ParamSet
BPSolver::calculateNextPiMessage (Edge* edge)
{
// πX(Zi)
BayesNode* z = edge->getSource();
BayesNode* x = edge->getDestination();
ParamSet zxPiNextMessage (z->getDomainSize());
CEdgeSet zChildLinks = M(z)->getIncomingChildLinks();
stringstream* calcs1 = 0;
stringstream* calcs2 = 0;
for (unsigned zi = 0; zi < z->getDomainSize(); zi++) {
double product = M(z)->getPiValue (zi);
if (DL >= 5) {
calcs1 = new stringstream;
calcs2 = new stringstream;
*calcs1 << PI << "(" << z->getLabel() << ")";
*calcs1 << "[" << z->getDomain()[zi] << "]" ;
*calcs2 << product;
}
for (unsigned i = 0; i < zChildLinks.size(); i++) {
assert (zChildLinks[i]->getDestination() == z);
if (zChildLinks[i]->getSource() != x) {
product *= zChildLinks[i]->getMessage()[zi];
if (DL >= 5) {
*calcs1 << "." << LD << "(" << zChildLinks[i]->getSource()->getLabel();
*calcs1 << "-->" << z->getLabel() << ")";
*calcs1 << "[" << z->getDomain()[zi] + "]" ;
*calcs2 << " * " << zChildLinks[i]->getMessage()[zi];
}
}
}
zxPiNextMessage[zi] = product;
if (DL >= 5) {
cout << " " << PI << "(" << z->getLabel();
cout << "-->" << x->getLabel() << ")" ;
cout << "[" << z->getDomain()[zi] << "]" ;
cout << " = " << (*calcs1).str();
if (zChildLinks.size() == 1) {
cout << " = " << product << endl;
} else {
cout << " = " << (*calcs2).str();
cout << " = " << product << endl;
}
delete calcs1;
delete calcs2;
}
}
return zxPiNextMessage;
}
ParamSet
BPSolver::calculateNextLambdaMessage (Edge* edge)
{
// λY(Xi)
BayesNode* y = edge->getSource();
BayesNode* x = edge->getDestination();
if (!M(y)->receivedBottomInfluence()) {
//cout << "returning 1" << endl;
//return edge->getMessage();
}
if (x->hasEvidence()) {
//cout << "returning 2" << endl;
//return edge->getMessage();
}
ParamSet yxLambdaNextMessage (x->getDomainSize());
CEdgeSet yParentLinks = M(y)->getIncomingParentLinks();
const vector<CptEntry>& allEntries = y->getCptEntries();
int parentIndex = y->getIndexOfParent (x);
stringstream* calcs1 = 0;
stringstream* calcs2 = 0;
vector<CptEntry> entries;
DConstraint constr = make_pair (parentIndex, 0);
for (unsigned i = 0; i < allEntries.size(); i++) {
if (allEntries[i].matchConstraints(constr)) {
entries.push_back (allEntries[i]);
}
}
ParamSet messageProducts (entries.size());
for (unsigned k = 0; k < entries.size(); k++) {
if (DL >= 5) {
calcs1 = new stringstream;
calcs2 = new stringstream;
}
double messageProduct = 1.0;
const DConf& conf = entries[k].getDomainConfiguration();
for (unsigned i = 0; i < yParentLinks.size(); i++) {
assert (yParentLinks[i]->getDestination() == y);
if (yParentLinks[i]->getSource() != x) {
if (DL >= 5) {
if (messageProduct != 1.0) *calcs1 << "*" ;
if (messageProduct != 1.0) *calcs2 << "*" ;
*calcs1 << PI << "(" << yParentLinks[i]->getSource()->getLabel();
*calcs1 << "-->" << y->getLabel() << ")" ;
*calcs1 << "[" ;
*calcs1 << yParentLinks[i]->getSource()->getDomain()[conf[i]];
*calcs1 << "]" ;
*calcs2 << yParentLinks[i]->getMessage()[conf[i]];
}
messageProduct *= yParentLinks[i]->getMessage()[conf[i]];
}
}
messageProducts[k] = messageProduct;
if (DL >= 5) {
cout << " mp" << k;
cout << " = " << (*calcs1).str();
if (yParentLinks.size() == 1) {
cout << 1 << endl;
} else if (yParentLinks.size() == 2) {
cout << " = " << messageProduct << endl;
} else {
cout << " = " << (*calcs2).str();
cout << " = " << messageProduct << endl;
}
delete calcs1;
delete calcs2;
}
}
for (unsigned xi = 0; xi < x->getDomainSize(); xi++) {
if (DL >= 5) {
calcs1 = new stringstream;
calcs2 = new stringstream;
}
vector<CptEntry> entries;
DConstraint constr = make_pair (parentIndex, xi);
for (unsigned i = 0; i < allEntries.size(); i++) {
if (allEntries[i].matchConstraints(constr)) {
entries.push_back (allEntries[i]);
}
}
double outerSum = 0.0;
for (unsigned yi = 0; yi < y->getDomainSize(); yi++) {
if (DL >= 5) {
(yi != 0) ? *calcs1 << " + {" : *calcs1 << "{" ;
(yi != 0) ? *calcs2 << " + {" : *calcs2 << "{" ;
}
double innerSum = 0.0;
for (unsigned k = 0; k < entries.size(); k++) {
if (DL >= 5) {
if (k != 0) *calcs1 << " + " ;
if (k != 0) *calcs2 << " + " ;
*calcs1 << y->cptEntryToString (yi, entries[k]);
*calcs1 << ".mp" << k;
*calcs2 << y->getProbability (yi, entries[k]);
*calcs2 << "*" << messageProducts[k];
}
innerSum += y->getProbability (yi, entries[k]) * messageProducts[k];
}
outerSum += innerSum * M(y)->getLambdaValue (yi);
if (DL >= 5) {
*calcs1 << "}." << LD << "(" << y->getLabel() << ")" ;
*calcs1 << "[" << y->getDomain()[yi] << "]";
*calcs2 << "}*" << M(y)->getLambdaValue (yi);
}
}
yxLambdaNextMessage[xi] = outerSum;
if (DL >= 5) {
cout << " " << LD << "(" << y->getLabel();
cout << "-->" << x->getLabel() << ")" ;
cout << "[" << x->getDomain()[xi] << "]" ;
cout << " = " << (*calcs1).str();
cout << " = " << (*calcs2).str();
cout << " = " << outerSum << endl;
delete calcs1;
delete calcs2;
}
}
return yxLambdaNextMessage;
}
ParamSet
BPSolver::getJointByJunctionNode (const VidSet& jointVids) const
{
BnNodeSet jointVars;
for (unsigned i = 0; i < jointVids.size(); i++) {
jointVars.push_back (bn_->getBayesNode (jointVids[i]));
}
BayesNet* mrn = bn_->getMinimalRequesiteNetwork (jointVids);
BnNodeSet parents;
unsigned dsize = 1;
for (unsigned i = 0; i < jointVars.size(); i++) {
parents.push_back (mrn->getBayesNode (jointVids[i]));
dsize *= jointVars[i]->getDomainSize();
}
unsigned nParams = dsize * dsize;
ParamSet params (nParams);
for (unsigned i = 0; i < nParams; i++) {
unsigned row = i / dsize;
unsigned col = i % dsize;
if (row == col) {
params[i] = 1;
} else {
params[i] = 0;
}
}
unsigned maxVid = std::numeric_limits<unsigned>::max();
Distribution* dist = new Distribution (params);
mrn->addNode (maxVid, dsize, NO_EVIDENCE, parents, dist);
mrn->setIndexes();
BPSolver solver (*mrn);
solver.runSolver();
const ParamSet& results = solver.getPosterioriOf (maxVid);
delete mrn;
delete dist;
return results;
}
ParamSet
BPSolver::getJointByChainRule (const VidSet& jointVids) const
{
BnNodeSet jointVars;
for (unsigned i = 0; i < jointVids.size(); i++) {
jointVars.push_back (bn_->getBayesNode (jointVids[i]));
}
BayesNet* mrn = bn_->getMinimalRequesiteNetwork (jointVids[0]);
BPSolver solver (*mrn);
solver.runSolver();
ParamSet prevBeliefs = solver.getPosterioriOf (jointVids[0]);
delete mrn;
VarSet observedVars = {jointVars[0]};
for (unsigned i = 1; i < jointVids.size(); i++) {
mrn = bn_->getMinimalRequesiteNetwork (jointVids[i]);
ParamSet newBeliefs;
vector<DConf> confs =
Util::getDomainConfigurations (observedVars);
for (unsigned j = 0; j < confs.size(); j++) {
for (unsigned k = 0; k < observedVars.size(); k++) {
if (!observedVars[k]->hasEvidence()) {
BayesNode* node = mrn->getBayesNode (observedVars[k]->getVarId());
if (node) {
node->setEvidence (confs[j][k]);
}
}
}
BPSolver solver (*mrn);
solver.runSolver();
ParamSet beliefs = solver.getPosterioriOf (jointVids[i]);
for (unsigned k = 0; k < beliefs.size(); k++) {
newBeliefs.push_back (beliefs[k]);
}
}
int count = -1;
for (unsigned j = 0; j < newBeliefs.size(); j++) {
if (j % jointVars[i]->getDomainSize() == 0) {
count ++;
}
newBeliefs[j] *= prevBeliefs[count];
}
prevBeliefs = newBeliefs;
observedVars.push_back (jointVars[i]);
delete mrn;
}
return prevBeliefs;
}
void
BPSolver::printMessageStatusOf (const BayesNode* var) const
{
cout << left;
cout << setw (10) << "domain" ;
cout << setw (20) << PI << "(" + var->getLabel() + ")" ;
cout << setw (20) << LD << "(" + var->getLabel() + ")" ;
cout << setw (16) << "belief" ;
cout << endl;
cout << "--------------------------------" ;
cout << "--------------------------------" ;
cout << endl;
BPNodeInfo* x = M(var);
ParamSet& piVals = x->getPiValues();
ParamSet& ldVals = x->getLambdaValues();
ParamSet beliefs = x->getBeliefs();
const Domain& domain = var->getDomain();
CBnNodeSet& childs = var->getChilds();
for (unsigned xi = 0; xi < var->getDomainSize(); xi++) {
cout << setw (10) << domain[xi];
cout << setw (19) << piVals[xi];
cout << setw (19) << ldVals[xi];
cout.precision (PRECISION);
cout << setw (16) << beliefs[xi];
cout << endl;
}
cout << endl;
if (childs.size() > 0) {
string s = "(" + var->getLabel() + ")" ;
for (unsigned j = 0; j < childs.size(); j++) {
cout << setw (10) << "domain" ;
cout << setw (28) << PI + childs[j]->getLabel() + s;
cout << setw (28) << LD + childs[j]->getLabel() + s;
cout << endl;
cout << "--------------------------------" ;
cout << "--------------------------------" ;
cout << endl;
/* FIXME
const ParamSet& piMessage = x->getPiMessage (childs[j]);
const ParamSet& lambdaMessage = x->getLambdaMessage (childs[j]);
for (unsigned xi = 0; xi < var->getDomainSize(); xi++) {
cout << setw (10) << domain[xi];
cout.precision (PRECISION);
cout << setw (27) << piMessage[xi];
cout.precision (PRECISION);
cout << setw (27) << lambdaMessage[xi];
cout << endl;
}
cout << endl;
*/
}
}
}
void
BPSolver::printAllMessageStatus (void) const
{
CBnNodeSet nodes = bn_->getBayesNodes();
for (unsigned i = 0; i < nodes.size(); i++) {
printMessageStatusOf (nodes[i]);
}
}