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yap-6.3/packages/CLPBN/clpbn/ground_factors.yap

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2012-01-10 17:01:06 +00:00
%parfactor(
% [ability(P),grade(C,S), satisfaction(C,S,P)],
% \phi = [....],
% [P,C,S],
% [P \in [p1,p2,p4], C \in [c1,c3], S \in [s2,s3]]).
% [S \= s2])
:- module(clpbn_ground_factors, [
generate_bn/2,
ground_parfactors/1]).
:- use_module(library(bhash), [
b_hash_new/1,
b_hash_lookup/3,
b_hash_insert/4]).
:- use_module(library(pfl), [
factor/5,
skolem/2]).
:- use_module(library(clpbn/dists), [
dist/4]).
%
% generate a CLP(BN) network that can be run in CLP(BN).
%
generate_bn(QueryVars, AllAttVars) :-
attributes:all_attvars(AVars),
b_hash_new(H0),
check_for_evidence(AVars, EVars),
run_through_factors(QueryVars, H0, H1, AllAttVars, IVars),
run_through_factors(EVars, H1, _HF, IVars, []).
check_for_evidence(V.AVars, V.EVars) :-
clpbn:get_atts(V,[evidence(_E)]), !,
check_for_evidence(AVars, EVars).
check_for_evidence(_V.AVars, EVars) :-
check_for_evidence(AVars, EVars).
check_for_evidence([], []).
run_through_factors([], H, H) --> [].
run_through_factors(V.Vars, H0, HF) -->
{ clpbn:get_atts(V,[key(K)]),
b_hash_lookup(K,V,H0)
}, !,
run_through_factors(Vars, H0, HF).
run_through_factors(V.Vars, H0, HF) -->
% it is a new clpbn variable
[V],
{
% should already have a key
clpbn:get_atts(V,[key(K)]),
% insert it into a table of seen variables
b_hash_insert(H0,K,V,HI),
construct_clpbn_node(K, V, HI, MoreVars, Vars)
},
run_through_factors(MoreVars, HI, HF).
% aggregates are special.
construct_clpbn_node(K, V, HI) -->
% and get the corresponding factor
{ factor(Id, [K|Ks], _, avg, Constraints) }, !,
{
skolem(K, Domain),
dist(avg(Domain, Parents), DistId, K, Parents),
clpbn:put_atts(V,[dist(DistId,Parents)]),
% we also need to set the constraints
% this should set all the keys to rights
run(Constraints)
},
% now let's look up parents and set up the graph
run_bayesian_factor(Ks, HI, Parents, []).
construct_clpbn_node(K, V, HI) -->
{
% and get the corresponding factor
factor(Id, [K|Ks], _, _Phi, Constraints),
factor_to_dist(Id, DistId),
% and the dist constraint
clpbn:put_atts(V,[dist(DistId,Parents)]),
% we also need to set the constraints
% this should set all the keys to rights
run(Constraints)
},
% now let's look up parents and set up the graph
run_bayesian_factor(Ks, HI, Parents, []).
factor_to_dist(Id, NewId) :-
factor(Id, [K|Ks], _, Phi, _Constraints),
skolem(K, Domain),
( is_list(Phi)
->
CPT = Phi
;
call(user:Phi, CPT)
),
keys_to_sizes(Ks, Szs),
dist(p(Domain, CPT, Szs), NewId, K, Szs).
keys_to_sizes([], []).
keys_to_sizes(K.Ks, Sz.Szs) :-
skolem(K, Domain),
length(Domain, Sz),
keys_to_sizes(Ks, Szs).
run([]).
run(Goal.Constraints) :-
user:Goal, !,
run(Constraints).
run_bayesian_factor([], _H, Vs, Vs) --> [].
run_bayesian_factor(K.Ks, H, Vs, Vs0) -->
run_var(K, H, Vs, Vs1),
run_bayesian_factor(Ks, H, Vs1, Vs0).
%
% this function returns a list of *new* variables
%
% collection of random variables
run_var(avg(Els), H, Vs, Vs0) --> !,
run_vars(Els, H, Vs, Vs0).
% existing random variable
run_var(K, H, V.Vs, Vs) -->
{ b_hash_lookup(K,V,H) }, !.
% new random variable
run_var(K, _H, V.Vs, Vs) -->
[V],
{
clpbn:put_atts(V,[key(K)])
}.
run_vars([], _H, Vs, Vs) --> [].
run_vars(K.Els, H, Vs, Vs0) -->
run_var(K, H, Vs, VsI),
run_vars(Els, H, VsI, Vs0).
ground_parfactors(ParFactors) :-
findall(Factor, factor(Factor), SourceFactors),
run_all_parfactors(SourceFactors, ParFactors).
factor(Factor) :-
user:parfactor(Factor).
factor(Factor) :-
user:bayes(Factor).
run_all_parfactors([], []).
run_all_parfactors(Source.SourceFactors, Factor.ParFactors) :-
run_parfactors(Source, Factor),
run_all_parfactors(SourceFactors, ParFactors).
run_parfactors((Formula ; Phi ; ConstraintGenerator), parfactor(Formula, Phi, FV, Domain, NewConstraints)) :-
term_variables(Formula, FreeVars),
FV =.. fv(FreeVars),
evaluate_constraints(FV, ConstraintGenerator, NewConstraints, Domain).
evaluate_constraints(FreeVars, Constraint.ConstraintGenerators, NC, Domain) :-
functor(FreeVars, fv, NOf),
setof(FreeVars, user:Constraint, Bindings),
run_free_vars(0, NOf, FreeVars, Bindings, Domain, Domain0),
get_list_of_conditions(Domain, 0, N, Conditions),
add_extra_constraints(N, Conditions, Bindings, NC, NC0),
evaluate_constraints(FreeVars, ConstraintGenerators, NC0, Domain0).
evaluate_constraints(_FreeVars, [], []).
run_free_vars(N, N, _FreeVars, _Bindings) --> !.
run_free_vars(I0, N, FreeVars, Bindings) -->
{ I is I0+1,
arg(I, FreeVars, V),
Bindings = B._,
arg(I, B, C), ground(C)
}, !,
{ setof(C, check_val(Bindings, I, C), Dom) },
[domain(I,V,Dom)],
run_free_vars(I, N, FreeVars, Bindings).
run_free_vars(I0, N, FreeVars, Bindings) -->
I is I0+1,
run_free_vars(I, N, FreeVars, Bindings).
add_extra_constraints(0, [], _Bindings) --> !.
add_extra_constraints(1, _Conditions, _Bindings) --> !.
add_extra_constraints(N, Conditions, Bindings) -->
{ extract_unique(Conditions, NewConditions) }, !,
{ N1 is N-1 },
add_extra_constraints(N1, NewConditions, Bindings).
add_extra_constraints(N, [dom(I1,V1,Dom1),dom(I2,V2,Dom2)|Conditions], Bindings) -->
{ length(Dom1, Sz), length(Dom2, Sz) }, !,
{ N1 is N-2 },
{ generate_map(Bindings, I1, I2, Mapping) },
[map(V1,V2,Mapping)],
add_extra_constraints(N1, dom(I1,V1,Dom1).Conditions, Bindings).
add_extra_constraints(_N, Conditions, Bindings) -->
[or(Vs,Or)],
{ gather_vs(Conditions, Vs, Indices),
generate(Bindings, Indices, Or) }.
% domain is a singleton constant
extract_unique(domain(_,_,[_]).Conditions, Conditions) :- !.
extract_unique(_.Conditions, NewConditions) :-
extract_unique(Conditions, NewConditions).
get_list_of_conditions([], N, N, []).
get_list_of_conditions(Dom._, N, N, _Conditions) :-
var(Dom), !.
get_list_of_conditions(Dom.Domain, I0, N, Dom.Conditions) :-
I is I0+1,
get_list_of_conditions(Domain, I, N, Conditions).
check_val(B._Bindings, I, C) :-
arg(I, B, C).
check_val(_.Bindings, I, C) :-
check_val(Bindings, I, C).
generate_map(B.Bindings, I1, I2, [[A1|A2]|Mapping]) :-
arg(I1, B, A1),
arg(I2, B, A2),
generate_map(Bindings, I1, I2, Mapping).
gather_vs([], [], []).
gather_vs(domain(I,V,_).Conditions, V.Vs, I.Indices) :-
gather_vs(Conditions, Vs, Indices).
generate([], _, []).
generate(B.Bindings, Indices, O.Or) :-
generate_el(B, Indices, O),
generate(Bindings, Indices, Or).
generate_el(_B, [], []).
generate_el(B, I.Indices, A.O) :-
arg(I, B, A),
generate_el(B, Indices, O).