2013-02-07 20:09:10 +00:00
										 
									 
								 
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								#include <cassert>
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								#include <sstream>
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											2012-06-12 16:29:57 +01:00
										 
									 
								 
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								#include "LiftedBp.h"
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								#include "LiftedOperations.h"
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								#include "WeightedBp.h"
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								#include "FactorGraph.h"
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								namespace Horus {
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								LiftedBp::LiftedBp (const ParfactorList& parfactorList)
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								    : LiftedSolver (parfactorList)
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								{
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								  refineParfactors();
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								  createFactorGraph();
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								  solver_ = new WeightedBp (*fg_, getWeights());
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								}
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								LiftedBp::~LiftedBp()
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								{
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								  delete solver_;
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								  delete fg_;
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								}
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								Params
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								LiftedBp::solveQuery (const Grounds& query)
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								{
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								  assert (query.empty() == false);
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								  Params res;
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								  std::vector<PrvGroup> groups = getQueryGroups (query);
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								  if (query.size() == 1) {
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								    res = solver_->getPosterioriOf (groups[0]);
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								  } else {
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								    ParfactorList::iterator it = pfList_.begin();
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								    size_t idx = pfList_.size();
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								    size_t count = 0;
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								    while (it != pfList_.end()) {
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								      if ((*it)->containsGrounds (query)) {
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								        idx = count;
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								        break;
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								      }
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								      ++ it;
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								      ++ count;
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								    }
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								    if (idx == pfList_.size()) {
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								      res = getJointByConditioning (pfList_, query);
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								    } else {
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								      VarIds queryVids;
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								      for (unsigned i = 0; i < groups.size(); i++) {
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								        queryVids.push_back (groups[i]);
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								      }
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								      res = solver_->getFactorJoint (fg_->facNodes()[idx], queryVids);
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								    }
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								  }
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								  return res;
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								}
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								void
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								LiftedBp::printSolverFlags() const
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								{
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								  std::stringstream ss;
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								  ss << "lifted bp [" ;
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								  ss << "bp_msg_schedule=" ;
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								  typedef WeightedBp::MsgSchedule MsgSchedule;
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								  switch (WeightedBp::msgSchedule()) {
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								    case MsgSchedule::seqFixedSch:    ss << "seq_fixed";    break;
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								    case MsgSchedule::seqRandomSch:   ss << "seq_random";   break;
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								    case MsgSchedule::parallelSch:    ss << "parallel";     break;
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								    case MsgSchedule::maxResidualSch: ss << "max_residual"; break;
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								  }
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								  ss << ",bp_max_iter=" << WeightedBp::maxIterations();
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								  ss << ",bp_accuracy=" << WeightedBp::accuracy();
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								  ss << ",log_domain=" << Util::toString (Globals::logDomain);
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								  ss << "]" ;
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								  std::cout << ss.str() << std::endl;
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								}
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								void
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								LiftedBp::refineParfactors()
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								{
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								  pfList_ = parfactorList;
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								  while (iterate() == false);
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								  if (Globals::verbosity > 2) {
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								    Util::printHeader ("AFTER REFINEMENT");
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								    pfList_.print();
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								  }
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								}
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								bool
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								LiftedBp::iterate()
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								{
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								  ParfactorList::iterator it = pfList_.begin();
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								  while (it != pfList_.end()) {
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								    const ProbFormulas& args = (*it)->arguments();
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								    for (size_t i = 0; i < args.size(); i++) {
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								      LogVarSet lvs = (*it)->logVarSet() - args[i].logVars();
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								      if ((*it)->constr()->isCountNormalized (lvs) == false) {
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								        Parfactors pfs = LiftedOperations::countNormalize (*it, lvs);
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								        it = pfList_.removeAndDelete (it);
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								        pfList_.add (pfs);
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								        return false;
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								      }
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								    }
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								    ++ it;
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								  }
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								  return true;
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								}
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								std::vector<PrvGroup>
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								LiftedBp::getQueryGroups (const Grounds& query)
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								{
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								  std::vector<PrvGroup> queryGroups;
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											2012-05-31 21:12:46 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								  for (unsigned i = 0; i < query.size(); i++) {
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								    ParfactorList::const_iterator it = pfList_.begin();
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								    for (; it != pfList_.end(); ++it) {
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								      if ((*it)->containsGround (query[i])) {
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								        queryGroups.push_back ((*it)->findGroup (query[i]));
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								        break;
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								      }
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								    }
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								  }
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								  assert (queryGroups.size() == query.size());
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								  return queryGroups;
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								}
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								
							 | 
						
					
						
							
								
									
										
										
										
											2012-09-11 18:40:41 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								void
							 | 
						
					
						
							
								
									
										
										
										
											2013-02-28 19:45:37 +00:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								LiftedBp::createFactorGraph()
							 | 
						
					
						
							
								
									
										
										
										
											2012-05-31 21:12:46 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								{
							 | 
						
					
						
							
								
									
										
										
										
											2012-09-11 18:40:41 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								  fg_ = new FactorGraph();
							 | 
						
					
						
							
								
									
										
										
										
											2012-05-31 21:12:46 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								  ParfactorList::const_iterator it = pfList_.begin();
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								  for (; it != pfList_.end(); ++it) {
							 | 
						
					
						
							
								
									
										
										
										
											2013-02-07 13:37:15 +00:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								    std::vector<PrvGroup> groups = (*it)->getAllGroups();
							 | 
						
					
						
							
								
									
										
										
										
											2012-05-31 21:12:46 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								    VarIds varIds;
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								    for (size_t i = 0; i < groups.size(); i++) {
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								      varIds.push_back (groups[i]);
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								    }
							 | 
						
					
						
							
								
									
										
										
										
											2012-09-11 18:40:41 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								    fg_->addFactor (Factor (varIds, (*it)->ranges(), (*it)->params()));
							 | 
						
					
						
							
								
									
										
										
										
											2012-05-31 21:12:46 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								  }
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								}
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								
							 | 
						
					
						
							
								
									
										
										
										
											2013-02-07 13:37:15 +00:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								std::vector<std::vector<unsigned>>
							 | 
						
					
						
							
								
									
										
										
										
											2013-02-28 19:45:37 +00:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								LiftedBp::getWeights() const
							 | 
						
					
						
							
								
									
										
										
										
											2012-05-31 21:12:46 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								{
							 | 
						
					
						
							
								
									
										
										
										
											2013-02-07 13:37:15 +00:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								  std::vector<std::vector<unsigned>> weights;
							 | 
						
					
						
							
								
									
										
										
										
											2012-05-31 21:12:46 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								  weights.reserve (pfList_.size());
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								  ParfactorList::const_iterator it = pfList_.begin();
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								  for (; it != pfList_.end(); ++it) {
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								    const ProbFormulas& args = (*it)->arguments();
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								    weights.push_back ({ });
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								    weights.back().reserve (args.size());
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								    for (size_t i = 0; i < args.size(); i++) {
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								      LogVarSet lvs = (*it)->logVarSet() - args[i].logVars();
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								      weights.back().push_back ((*it)->constr()->getConditionalCount (lvs));
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								    }
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								  }
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								  return weights;
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								}
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								
							 | 
						
					
						
							
								
									
										
										
										
											2012-06-14 11:57:00 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								unsigned
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								LiftedBp::rangeOfGround (const Ground& gr)
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								{
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								  ParfactorList::iterator it = pfList_.begin();
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								  while (it != pfList_.end()) {
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								    if ((*it)->containsGround (gr)) {
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								      PrvGroup prvGroup = (*it)->findGroup (gr);
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								      return (*it)->range ((*it)->indexOfGroup (prvGroup));
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								    }
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								    ++ it;
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								  }
							 | 
						
					
						
							
								
									
										
										
										
											2013-02-08 21:01:53 +00:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								  return Util::maxUnsigned();
							 | 
						
					
						
							
								
									
										
										
										
											2012-06-14 11:57:00 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								}
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								
							 | 
						
					
						
							
								
									
										
										
										
											2012-12-17 18:39:42 +00:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								
							 | 
						
					
						
							
								
									
										
										
										
											2012-06-14 11:57:00 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								Params
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								LiftedBp::getJointByConditioning (
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								    const ParfactorList& pfList,
							 | 
						
					
						
							
								
									
										
										
										
											2012-11-10 00:18:20 +00:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								    const Grounds& query)
							 | 
						
					
						
							
								
									
										
										
										
											2012-06-14 11:57:00 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								{
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								  LiftedBp solver (pfList);
							 | 
						
					
						
							
								
									
										
										
										
											2012-11-10 00:18:20 +00:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								  Params prevBeliefs = solver.solveQuery ({query[0]});
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								  Grounds obsGrounds = {query[0]};
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								  for (size_t i = 1; i < query.size(); i++) {
							 | 
						
					
						
							
								
									
										
										
										
											2012-06-14 11:57:00 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								    Params newBeliefs;
							 | 
						
					
						
							
								
									
										
										
										
											2013-02-07 13:37:15 +00:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								    std::vector<ObservedFormula> obsFs;
							 | 
						
					
						
							
								
									
										
										
										
											2012-06-14 11:57:00 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								    Ranges obsRanges;
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								    for (size_t j = 0; j < obsGrounds.size(); j++) {
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								      obsFs.push_back (ObservedFormula (
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								          obsGrounds[j].functor(), 0, obsGrounds[j].args()));
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								      obsRanges.push_back (rangeOfGround (obsGrounds[j]));
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								    }
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								    Indexer indexer (obsRanges, false);
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								    while (indexer.valid()) {
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								      for (size_t j = 0; j < obsFs.size(); j++) {
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								        obsFs[j].setEvidence (indexer[j]);
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								      }
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								      ParfactorList tempPfList (pfList);
							 | 
						
					
						
							
								
									
										
										
										
											2012-11-10 00:18:20 +00:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								      LiftedOperations::absorveEvidence (tempPfList, obsFs);
							 | 
						
					
						
							
								
									
										
										
										
											2012-06-14 11:57:00 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								      LiftedBp solver (tempPfList);
							 | 
						
					
						
							
								
									
										
										
										
											2012-11-10 00:18:20 +00:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								      Params beliefs = solver.solveQuery ({query[i]});
							 | 
						
					
						
							
								
									
										
										
										
											2012-06-14 11:57:00 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								      for (size_t k = 0; k < beliefs.size(); k++) {
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								        newBeliefs.push_back (beliefs[k]);
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								      }
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								      ++ indexer;
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								    }
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								    int count = -1;
							 | 
						
					
						
							
								
									
										
										
										
											2012-11-10 00:18:20 +00:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								    unsigned range = rangeOfGround (query[i]);
							 | 
						
					
						
							
								
									
										
										
										
											2012-06-14 11:57:00 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								    for (size_t j = 0; j < newBeliefs.size(); j++) {
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								      if (j % range == 0) {
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								        count ++;
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								      }
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								      newBeliefs[j] *= prevBeliefs[count];
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								    }
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								    prevBeliefs = newBeliefs;
							 | 
						
					
						
							
								
									
										
										
										
											2012-11-10 00:18:20 +00:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								    obsGrounds.push_back (query[i]);
							 | 
						
					
						
							
								
									
										
										
										
											2012-06-14 11:57:00 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								  }
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								  return prevBeliefs;
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								}
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
							
								
							 | 
						
					
						
							
								
									
										
										
										
											2013-02-08 21:12:46 +00:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								}  // namespace Horus
							 | 
						
					
						
							
								
									
										
										
										
											2013-02-07 23:53:13 +00:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
							
								
							 |