diff --git a/.gitmodules b/.gitmodules
index f4839bef8..44cd4fbb4 100644
--- a/.gitmodules
+++ b/.gitmodules
@@ -28,3 +28,6 @@
 [submodule "packages/plunit"]
 	path = packages/plunit
 	url = ssh://vsc@yap.git.sourceforge.net/gitroot/yap/plunit
+[submodule "packages/R"]
+	path = packages/R
+	url = ssh://vsc@yap.git.sourceforge.net/gitroot/yap/R
diff --git a/Makefile.in b/Makefile.in
index 09eae7223..463b800e9 100755
--- a/Makefile.in
+++ b/Makefile.in
@@ -667,6 +667,7 @@ all: startup.yss
 	@INSTALL_DLLS@ (cd packages/clib; $(MAKE))
 	@INSTALL_DLLS@ (cd packages/http; $(MAKE))
 	@INSTALL_DLLS@ (cd packages/plunit; $(MAKE))
+	@INSTALL_DLLS@ (cd packages/R; $(MAKE))
 	@INSTALL_DLLS@ (cd packages/RDF; $(MAKE))
 	@INSTALL_DLLS@ (cd packages/semweb; $(MAKE))
 	@INSTALL_DLLS@ (cd packages/sgml; $(MAKE))
@@ -725,6 +726,7 @@ install_unix: startup.yss libYap.a
 	@INSTALL_DLLS@ (cd packages/http; $(MAKE) install)
 	@INSTALL_DLLS@ (cd packages/plunit; $(MAKE) install)
 	@INSTALL_DLLS@ (cd packages/sgml; $(MAKE) install)
+	@INSTALL_DLLS@ (cd packages/R; $(MAKE) install)
 	@INSTALL_DLLS@ (cd packages/RDF; $(MAKE) install)
 	@INSTALL_DLLS@ (cd packages/semweb; $(MAKE) install)
 	@INSTALL_DLLS@ (cd packages/zlib; $(MAKE) @ZLIB_INSTALL@)
@@ -775,6 +777,7 @@ install_win32: startup.yss
 	(cd packages/clib; $(MAKE) install)
 	(cd packages/plunit; $(MAKE) install)
 	(cd packages/http; $(MAKE) install)
+	(cd packages/R; $(MAKE) install)
 	(cd packages/RDF; $(MAKE) install)
 	(cd packages/sgml; $(MAKE) install)
 	(cd packages/semweb; $(MAKE) install)
@@ -832,6 +835,7 @@ clean: clean_docs
 	@INSTALL_DLLS@ (cd packages/clib; $(MAKE) clean)
 	@INSTALL_DLLS@ (cd packages/http; $(MAKE) clean)
 	@INSTALL_DLLS@ (cd packages/plunit; $(MAKE) clean)
+	@INSTALL_DLLS@ (cd packages/R; $(MAKE) clean)
 	@INSTALL_DLLS@ (cd packages/RDF; $(MAKE) clean)
 	@INSTALL_DLLS@ (cd packages/semweb; $(MAKE) clean)
 	@INSTALL_DLLS@ (cd packages/sgml; $(MAKE) clean)
diff --git a/configure b/configure
index c97773694..4afc37faa 100755
--- a/configure
+++ b/configure
@@ -1,6 +1,6 @@
 #! /bin/sh
 # Guess values for system-dependent variables and create Makefiles.
-# Generated by GNU Autoconf 2.67.
+# Generated by GNU Autoconf 2.68.
 #
 #
 # Copyright (C) 1992, 1993, 1994, 1995, 1996, 1998, 1999, 2000, 2001,
@@ -89,6 +89,7 @@ fi
 IFS=" ""	$as_nl"
 
 # Find who we are.  Look in the path if we contain no directory separator.
+as_myself=
 case $0 in #((
   *[\\/]* ) as_myself=$0 ;;
   *) as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
@@ -214,11 +215,18 @@ IFS=$as_save_IFS
   # We cannot yet assume a decent shell, so we have to provide a
 	# neutralization value for shells without unset; and this also
 	# works around shells that cannot unset nonexistent variables.
+	# Preserve -v and -x to the replacement shell.
 	BASH_ENV=/dev/null
 	ENV=/dev/null
 	(unset BASH_ENV) >/dev/null 2>&1 && unset BASH_ENV ENV
 	export CONFIG_SHELL
-	exec "$CONFIG_SHELL" "$as_myself" ${1+"$@"}
+	case $- in # ((((
+	  *v*x* | *x*v* ) as_opts=-vx ;;
+	  *v* ) as_opts=-v ;;
+	  *x* ) as_opts=-x ;;
+	  * ) as_opts= ;;
+	esac
+	exec "$CONFIG_SHELL" $as_opts "$as_myself" ${1+"$@"}
 fi
 
     if test x$as_have_required = xno; then :
@@ -805,6 +813,9 @@ LIBS
 CPPFLAGS
 CXX
 CXXFLAGS
+LDFLAGS
+LIBS
+CPPFLAGS
 CCC
 CPP'
 
@@ -1211,7 +1222,7 @@ Try \`$0 --help' for more information"
     $as_echo "$as_me: WARNING: you should use --build, --host, --target" >&2
     expr "x$ac_option" : ".*[^-._$as_cr_alnum]" >/dev/null &&
       $as_echo "$as_me: WARNING: invalid host type: $ac_option" >&2
-    : ${build_alias=$ac_option} ${host_alias=$ac_option} ${target_alias=$ac_option}
+    : "${build_alias=$ac_option} ${host_alias=$ac_option} ${target_alias=$ac_option}"
     ;;
 
   esac
@@ -1548,7 +1559,7 @@ test -n "$ac_init_help" && exit $ac_status
 if $ac_init_version; then
   cat <<\_ACEOF
 configure
-generated by GNU Autoconf 2.67
+generated by GNU Autoconf 2.68
 
 Copyright (C) 2010 Free Software Foundation, Inc.
 This configure script is free software; the Free Software Foundation
@@ -1594,7 +1605,7 @@ sed 's/^/| /' conftest.$ac_ext >&5
 
 	ac_retval=1
 fi
-  eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
+  eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
   as_fn_set_status $ac_retval
 
 } # ac_fn_c_try_compile
@@ -1632,7 +1643,7 @@ sed 's/^/| /' conftest.$ac_ext >&5
 
 	ac_retval=1
 fi
-  eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
+  eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
   as_fn_set_status $ac_retval
 
 } # ac_fn_cxx_try_compile
@@ -1678,7 +1689,7 @@ fi
   # interfere with the next link command; also delete a directory that is
   # left behind by Apple's compiler.  We do this before executing the actions.
   rm -rf conftest.dSYM conftest_ipa8_conftest.oo
-  eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
+  eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
   as_fn_set_status $ac_retval
 
 } # ac_fn_c_try_link
@@ -1715,7 +1726,7 @@ sed 's/^/| /' conftest.$ac_ext >&5
 
     ac_retval=1
 fi
-  eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
+  eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
   as_fn_set_status $ac_retval
 
 } # ac_fn_c_try_cpp
@@ -1728,10 +1739,10 @@ fi
 ac_fn_c_check_header_mongrel ()
 {
   as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
-  if eval "test \"\${$3+set}\"" = set; then :
+  if eval \${$3+:} false; then :
   { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2" >&5
 $as_echo_n "checking for $2... " >&6; }
-if eval "test \"\${$3+set}\"" = set; then :
+if eval \${$3+:} false; then :
   $as_echo_n "(cached) " >&6
 fi
 eval ac_res=\$$3
@@ -1794,7 +1805,7 @@ $as_echo "$as_me: WARNING: $2: proceeding with the compiler's result" >&2;}
 esac
   { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2" >&5
 $as_echo_n "checking for $2... " >&6; }
-if eval "test \"\${$3+set}\"" = set; then :
+if eval \${$3+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   eval "$3=\$ac_header_compiler"
@@ -1803,7 +1814,7 @@ eval ac_res=\$$3
 	       { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
 $as_echo "$ac_res" >&6; }
 fi
-  eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
+  eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
 
 } # ac_fn_c_check_header_mongrel
 
@@ -1844,7 +1855,7 @@ sed 's/^/| /' conftest.$ac_ext >&5
        ac_retval=$ac_status
 fi
   rm -rf conftest.dSYM conftest_ipa8_conftest.oo
-  eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
+  eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
   as_fn_set_status $ac_retval
 
 } # ac_fn_c_try_run
@@ -1858,7 +1869,7 @@ ac_fn_c_check_header_compile ()
   as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
   { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2" >&5
 $as_echo_n "checking for $2... " >&6; }
-if eval "test \"\${$3+set}\"" = set; then :
+if eval \${$3+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   cat confdefs.h - <<_ACEOF >conftest.$ac_ext
@@ -1876,7 +1887,7 @@ fi
 eval ac_res=\$$3
 	       { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
 $as_echo "$ac_res" >&6; }
-  eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
+  eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
 
 } # ac_fn_c_check_header_compile
 
@@ -1888,7 +1899,7 @@ ac_fn_c_check_func ()
   as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
   { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2" >&5
 $as_echo_n "checking for $2... " >&6; }
-if eval "test \"\${$3+set}\"" = set; then :
+if eval \${$3+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   cat confdefs.h - <<_ACEOF >conftest.$ac_ext
@@ -1943,7 +1954,7 @@ fi
 eval ac_res=\$$3
 	       { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
 $as_echo "$ac_res" >&6; }
-  eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
+  eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
 
 } # ac_fn_c_check_func
 
@@ -2120,7 +2131,7 @@ rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
 rm -f conftest.val
 
   fi
-  eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
+  eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
   as_fn_set_status $ac_retval
 
 } # ac_fn_c_compute_int
@@ -2134,7 +2145,7 @@ ac_fn_c_check_type ()
   as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
   { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2" >&5
 $as_echo_n "checking for $2... " >&6; }
-if eval "test \"\${$3+set}\"" = set; then :
+if eval \${$3+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   eval "$3=no"
@@ -2175,7 +2186,7 @@ fi
 eval ac_res=\$$3
 	       { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
 $as_echo "$ac_res" >&6; }
-  eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
+  eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
 
 } # ac_fn_c_check_type
 
@@ -2188,7 +2199,7 @@ ac_fn_c_check_member ()
   as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
   { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2.$3" >&5
 $as_echo_n "checking for $2.$3... " >&6; }
-if eval "test \"\${$4+set}\"" = set; then :
+if eval \${$4+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   cat confdefs.h - <<_ACEOF >conftest.$ac_ext
@@ -2232,7 +2243,7 @@ fi
 eval ac_res=\$$4
 	       { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
 $as_echo "$ac_res" >&6; }
-  eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
+  eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
 
 } # ac_fn_c_check_member
 cat >config.log <<_ACEOF
@@ -2240,7 +2251,7 @@ This file contains any messages produced by compilers while
 running configure, to aid debugging if configure makes a mistake.
 
 It was created by $as_me, which was
-generated by GNU Autoconf 2.67.  Invocation command line was
+generated by GNU Autoconf 2.68.  Invocation command line was
 
   $ $0 $@
 
@@ -2498,7 +2509,7 @@ $as_echo "$as_me: loading site script $ac_site_file" >&6;}
       || { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
 $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
 as_fn_error $? "failed to load site script $ac_site_file
-See \`config.log' for more details" "$LINENO" 5 ; }
+See \`config.log' for more details" "$LINENO" 5; }
   fi
 done
 
@@ -2602,7 +2613,7 @@ if test -n "$ac_tool_prefix"; then
 set dummy ${ac_tool_prefix}gcc; ac_word=$2
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_prog_CC+set}" = set; then :
+if ${ac_cv_prog_CC+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -n "$CC"; then
@@ -2642,7 +2653,7 @@ if test -z "$ac_cv_prog_CC"; then
 set dummy gcc; ac_word=$2
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_prog_ac_ct_CC+set}" = set; then :
+if ${ac_cv_prog_ac_ct_CC+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -n "$ac_ct_CC"; then
@@ -2695,7 +2706,7 @@ if test -z "$CC"; then
 set dummy ${ac_tool_prefix}cc; ac_word=$2
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_prog_CC+set}" = set; then :
+if ${ac_cv_prog_CC+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -n "$CC"; then
@@ -2735,7 +2746,7 @@ if test -z "$CC"; then
 set dummy cc; ac_word=$2
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_prog_CC+set}" = set; then :
+if ${ac_cv_prog_CC+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -n "$CC"; then
@@ -2794,7 +2805,7 @@ if test -z "$CC"; then
 set dummy $ac_tool_prefix$ac_prog; ac_word=$2
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_prog_CC+set}" = set; then :
+if ${ac_cv_prog_CC+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -n "$CC"; then
@@ -2838,7 +2849,7 @@ do
 set dummy $ac_prog; ac_word=$2
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_prog_ac_ct_CC+set}" = set; then :
+if ${ac_cv_prog_ac_ct_CC+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -n "$ac_ct_CC"; then
@@ -2893,7 +2904,7 @@ fi
 test -z "$CC" && { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
 $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
 as_fn_error $? "no acceptable C compiler found in \$PATH
-See \`config.log' for more details" "$LINENO" 5 ; }
+See \`config.log' for more details" "$LINENO" 5; }
 
 # Provide some information about the compiler.
 $as_echo "$as_me:${as_lineno-$LINENO}: checking for C compiler version" >&5
@@ -3008,7 +3019,7 @@ sed 's/^/| /' conftest.$ac_ext >&5
 { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
 $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
 as_fn_error 77 "C compiler cannot create executables
-See \`config.log' for more details" "$LINENO" 5 ; }
+See \`config.log' for more details" "$LINENO" 5; }
 else
   { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
 $as_echo "yes" >&6; }
@@ -3051,7 +3062,7 @@ else
   { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
 $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
 as_fn_error $? "cannot compute suffix of executables: cannot compile and link
-See \`config.log' for more details" "$LINENO" 5 ; }
+See \`config.log' for more details" "$LINENO" 5; }
 fi
 rm -f conftest conftest$ac_cv_exeext
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_exeext" >&5
@@ -3110,7 +3121,7 @@ $as_echo "$ac_try_echo"; } >&5
 $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
 as_fn_error $? "cannot run C compiled programs.
 If you meant to cross compile, use \`--host'.
-See \`config.log' for more details" "$LINENO" 5 ; }
+See \`config.log' for more details" "$LINENO" 5; }
     fi
   fi
 fi
@@ -3121,7 +3132,7 @@ rm -f conftest.$ac_ext conftest$ac_cv_exeext conftest.out
 ac_clean_files=$ac_clean_files_save
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for suffix of object files" >&5
 $as_echo_n "checking for suffix of object files... " >&6; }
-if test "${ac_cv_objext+set}" = set; then :
+if ${ac_cv_objext+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   cat confdefs.h - <<_ACEOF >conftest.$ac_ext
@@ -3162,7 +3173,7 @@ sed 's/^/| /' conftest.$ac_ext >&5
 { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
 $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
 as_fn_error $? "cannot compute suffix of object files: cannot compile
-See \`config.log' for more details" "$LINENO" 5 ; }
+See \`config.log' for more details" "$LINENO" 5; }
 fi
 rm -f conftest.$ac_cv_objext conftest.$ac_ext
 fi
@@ -3172,7 +3183,7 @@ OBJEXT=$ac_cv_objext
 ac_objext=$OBJEXT
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether we are using the GNU C compiler" >&5
 $as_echo_n "checking whether we are using the GNU C compiler... " >&6; }
-if test "${ac_cv_c_compiler_gnu+set}" = set; then :
+if ${ac_cv_c_compiler_gnu+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   cat confdefs.h - <<_ACEOF >conftest.$ac_ext
@@ -3209,7 +3220,7 @@ ac_test_CFLAGS=${CFLAGS+set}
 ac_save_CFLAGS=$CFLAGS
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether $CC accepts -g" >&5
 $as_echo_n "checking whether $CC accepts -g... " >&6; }
-if test "${ac_cv_prog_cc_g+set}" = set; then :
+if ${ac_cv_prog_cc_g+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_save_c_werror_flag=$ac_c_werror_flag
@@ -3287,7 +3298,7 @@ else
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $CC option to accept ISO C89" >&5
 $as_echo_n "checking for $CC option to accept ISO C89... " >&6; }
-if test "${ac_cv_prog_cc_c89+set}" = set; then :
+if ${ac_cv_prog_cc_c89+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_cv_prog_cc_c89=no
@@ -3398,7 +3409,7 @@ if test -z "$CXX"; then
 set dummy $ac_tool_prefix$ac_prog; ac_word=$2
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_prog_CXX+set}" = set; then :
+if ${ac_cv_prog_CXX+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -n "$CXX"; then
@@ -3442,7 +3453,7 @@ do
 set dummy $ac_prog; ac_word=$2
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_prog_ac_ct_CXX+set}" = set; then :
+if ${ac_cv_prog_ac_ct_CXX+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -n "$ac_ct_CXX"; then
@@ -3520,7 +3531,7 @@ done
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether we are using the GNU C++ compiler" >&5
 $as_echo_n "checking whether we are using the GNU C++ compiler... " >&6; }
-if test "${ac_cv_cxx_compiler_gnu+set}" = set; then :
+if ${ac_cv_cxx_compiler_gnu+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   cat confdefs.h - <<_ACEOF >conftest.$ac_ext
@@ -3557,7 +3568,7 @@ ac_test_CXXFLAGS=${CXXFLAGS+set}
 ac_save_CXXFLAGS=$CXXFLAGS
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether $CXX accepts -g" >&5
 $as_echo_n "checking whether $CXX accepts -g... " >&6; }
-if test "${ac_cv_prog_cxx_g+set}" = set; then :
+if ${ac_cv_prog_cxx_g+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_save_cxx_werror_flag=$ac_cxx_werror_flag
@@ -3645,7 +3656,7 @@ do
 set dummy $ac_prog; ac_word=$2
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_prog_AWK+set}" = set; then :
+if ${ac_cv_prog_AWK+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -n "$AWK"; then
@@ -4208,7 +4219,7 @@ $SHELL "$ac_aux_dir/config.sub" sun4 >/dev/null 2>&1 ||
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking build system type" >&5
 $as_echo_n "checking build system type... " >&6; }
-if test "${ac_cv_build+set}" = set; then :
+if ${ac_cv_build+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_build_alias=$build_alias
@@ -4224,7 +4235,7 @@ fi
 $as_echo "$ac_cv_build" >&6; }
 case $ac_cv_build in
 *-*-*) ;;
-*) as_fn_error $? "invalid value of canonical build" "$LINENO" 5 ;;
+*) as_fn_error $? "invalid value of canonical build" "$LINENO" 5;;
 esac
 build=$ac_cv_build
 ac_save_IFS=$IFS; IFS='-'
@@ -4242,7 +4253,7 @@ case $build_os in *\ *) build_os=`echo "$build_os" | sed 's/ /-/g'`;; esac
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking host system type" >&5
 $as_echo_n "checking host system type... " >&6; }
-if test "${ac_cv_host+set}" = set; then :
+if ${ac_cv_host+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test "x$host_alias" = x; then
@@ -4257,7 +4268,7 @@ fi
 $as_echo "$ac_cv_host" >&6; }
 case $ac_cv_host in
 *-*-*) ;;
-*) as_fn_error $? "invalid value of canonical host" "$LINENO" 5 ;;
+*) as_fn_error $? "invalid value of canonical host" "$LINENO" 5;;
 esac
 host=$ac_cv_host
 ac_save_IFS=$IFS; IFS='-'
@@ -4275,7 +4286,7 @@ case $host_os in *\ *) host_os=`echo "$host_os" | sed 's/ /-/g'`;; esac
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking target system type" >&5
 $as_echo_n "checking target system type... " >&6; }
-if test "${ac_cv_target+set}" = set; then :
+if ${ac_cv_target+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test "x$target_alias" = x; then
@@ -4290,7 +4301,7 @@ fi
 $as_echo "$ac_cv_target" >&6; }
 case $ac_cv_target in
 *-*-*) ;;
-*) as_fn_error $? "invalid value of canonical target" "$LINENO" 5 ;;
+*) as_fn_error $? "invalid value of canonical target" "$LINENO" 5;;
 esac
 target=$ac_cv_target
 ac_save_IFS=$IFS; IFS='-'
@@ -4519,7 +4530,7 @@ fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for a BSD-compatible install" >&5
 $as_echo_n "checking for a BSD-compatible install... " >&6; }
 if test -z "$INSTALL"; then
-if test "${ac_cv_path_install+set}" = set; then :
+if ${ac_cv_path_install+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
@@ -4600,7 +4611,7 @@ if test -n "$ac_tool_prefix"; then
 set dummy ${ac_tool_prefix}ranlib; ac_word=$2
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_prog_RANLIB+set}" = set; then :
+if ${ac_cv_prog_RANLIB+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -n "$RANLIB"; then
@@ -4640,7 +4651,7 @@ if test -z "$ac_cv_prog_RANLIB"; then
 set dummy ranlib; ac_word=$2
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_prog_ac_ct_RANLIB+set}" = set; then :
+if ${ac_cv_prog_ac_ct_RANLIB+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -n "$ac_ct_RANLIB"; then
@@ -4692,7 +4703,7 @@ if test -n "$ac_tool_prefix"; then
 set dummy ${ac_tool_prefix}indent; ac_word=$2
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_prog_INDENT+set}" = set; then :
+if ${ac_cv_prog_INDENT+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -n "$INDENT"; then
@@ -4732,7 +4743,7 @@ if test -z "$ac_cv_prog_INDENT"; then
 set dummy indent; ac_word=$2
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_prog_ac_ct_INDENT+set}" = set; then :
+if ${ac_cv_prog_ac_ct_INDENT+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -n "$ac_ct_INDENT"; then
@@ -4784,7 +4795,7 @@ if test -n "$ac_tool_prefix"; then
 set dummy ${ac_tool_prefix}ar; ac_word=$2
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_prog_AR+set}" = set; then :
+if ${ac_cv_prog_AR+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -n "$AR"; then
@@ -4824,7 +4835,7 @@ if test -z "$ac_cv_prog_AR"; then
 set dummy ar; ac_word=$2
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_prog_ac_ct_AR+set}" = set; then :
+if ${ac_cv_prog_ac_ct_AR+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -n "$ac_ct_AR"; then
@@ -4876,7 +4887,7 @@ if test -n "$ac_tool_prefix"; then
 set dummy ${ac_tool_prefix}mpicc; ac_word=$2
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_prog_MPI_CC+set}" = set; then :
+if ${ac_cv_prog_MPI_CC+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -n "$MPI_CC"; then
@@ -4916,7 +4927,7 @@ if test -z "$ac_cv_prog_MPI_CC"; then
 set dummy mpicc; ac_word=$2
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_prog_ac_ct_MPI_CC+set}" = set; then :
+if ${ac_cv_prog_ac_ct_MPI_CC+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -n "$ac_ct_MPI_CC"; then
@@ -4967,7 +4978,7 @@ fi
 set dummy install-info; ac_word=$2
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_path_INSTALL_INFO+set}" = set; then :
+if ${ac_cv_path_INSTALL_INFO+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   case $INSTALL_INFO in
@@ -5009,7 +5020,7 @@ fi
 set dummy sh; ac_word=$2
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
 $as_echo_n "checking for $ac_word... " >&6; }
-if test "${ac_cv_path_SHELL+set}" = set; then :
+if ${ac_cv_path_SHELL+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   case $SHELL in
@@ -5056,7 +5067,7 @@ then
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lws2_32" >&5
 $as_echo_n "checking for main in -lws2_32... " >&6; }
-if test "${ac_cv_lib_ws2_32_main+set}" = set; then :
+if ${ac_cv_lib_ws2_32_main+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -5084,7 +5095,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_ws2_32_main" >&5
 $as_echo "$ac_cv_lib_ws2_32_main" >&6; }
-if test "x$ac_cv_lib_ws2_32_main" = x""yes; then :
+if test "x$ac_cv_lib_ws2_32_main" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_LIBWS2_32 1
 _ACEOF
@@ -5101,7 +5112,7 @@ fi
       CXX="${CXX}  -mno-cygwin"
       { $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lwsock32" >&5
 $as_echo_n "checking for main in -lwsock32... " >&6; }
-if test "${ac_cv_lib_wsock32_main+set}" = set; then :
+if ${ac_cv_lib_wsock32_main+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -5129,7 +5140,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_wsock32_main" >&5
 $as_echo "$ac_cv_lib_wsock32_main" >&6; }
-if test "x$ac_cv_lib_wsock32_main" = x""yes; then :
+if test "x$ac_cv_lib_wsock32_main" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_LIBWSOCK32 1
 _ACEOF
@@ -5143,7 +5154,7 @@ fi
     else
       { $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lwsock32" >&5
 $as_echo_n "checking for main in -lwsock32... " >&6; }
-if test "${ac_cv_lib_wsock32_main+set}" = set; then :
+if ${ac_cv_lib_wsock32_main+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -5171,7 +5182,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_wsock32_main" >&5
 $as_echo "$ac_cv_lib_wsock32_main" >&6; }
-if test "x$ac_cv_lib_wsock32_main" = x""yes; then :
+if test "x$ac_cv_lib_wsock32_main" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_LIBWSOCK32 1
 _ACEOF
@@ -5184,7 +5195,7 @@ fi
     fi
     { $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lpsapi" >&5
 $as_echo_n "checking for main in -lpsapi... " >&6; }
-if test "${ac_cv_lib_psapi_main+set}" = set; then :
+if ${ac_cv_lib_psapi_main+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -5212,7 +5223,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_psapi_main" >&5
 $as_echo "$ac_cv_lib_psapi_main" >&6; }
-if test "x$ac_cv_lib_psapi_main" = x""yes; then :
+if test "x$ac_cv_lib_psapi_main" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_LIBPSAPI 1
 _ACEOF
@@ -5249,7 +5260,7 @@ else
   ENABLE_WINCONSOLE="#"
   { $as_echo "$as_me:${as_lineno-$LINENO}: checking for sin in -lm" >&5
 $as_echo_n "checking for sin in -lm... " >&6; }
-if test "${ac_cv_lib_m_sin+set}" = set; then :
+if ${ac_cv_lib_m_sin+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -5283,7 +5294,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_m_sin" >&5
 $as_echo "$ac_cv_lib_m_sin" >&6; }
-if test "x$ac_cv_lib_m_sin" = x""yes; then :
+if test "x$ac_cv_lib_m_sin" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_LIBM 1
 _ACEOF
@@ -5294,7 +5305,7 @@ fi
 
   { $as_echo "$as_me:${as_lineno-$LINENO}: checking for socket in -lsocket" >&5
 $as_echo_n "checking for socket in -lsocket... " >&6; }
-if test "${ac_cv_lib_socket_socket+set}" = set; then :
+if ${ac_cv_lib_socket_socket+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -5328,7 +5339,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_socket_socket" >&5
 $as_echo "$ac_cv_lib_socket_socket" >&6; }
-if test "x$ac_cv_lib_socket_socket" = x""yes; then :
+if test "x$ac_cv_lib_socket_socket" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_LIBSOCKET 1
 _ACEOF
@@ -5339,7 +5350,7 @@ fi
 
     { $as_echo "$as_me:${as_lineno-$LINENO}: checking for getsockname in -lxnet" >&5
 $as_echo_n "checking for getsockname in -lxnet... " >&6; }
-if test "${ac_cv_lib_xnet_getsockname+set}" = set; then :
+if ${ac_cv_lib_xnet_getsockname+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -5373,7 +5384,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_xnet_getsockname" >&5
 $as_echo "$ac_cv_lib_xnet_getsockname" >&6; }
-if test "x$ac_cv_lib_xnet_getsockname" = x""yes; then :
+if test "x$ac_cv_lib_xnet_getsockname" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_LIBXNET 1
 _ACEOF
@@ -5384,7 +5395,7 @@ fi
 
   { $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lstdc++" >&5
 $as_echo_n "checking for main in -lstdc++... " >&6; }
-if test "${ac_cv_lib_stdcpp_main+set}" = set; then :
+if ${ac_cv_lib_stdcpp_main+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -5412,7 +5423,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_stdcpp_main" >&5
 $as_echo "$ac_cv_lib_stdcpp_main" >&6; }
-if test "x$ac_cv_lib_stdcpp_main" = x""yes; then :
+if test "x$ac_cv_lib_stdcpp_main" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_LIBSTDC__ 1
 _ACEOF
@@ -5423,7 +5434,7 @@ fi
 
   { $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lnsl" >&5
 $as_echo_n "checking for main in -lnsl... " >&6; }
-if test "${ac_cv_lib_nsl_main+set}" = set; then :
+if ${ac_cv_lib_nsl_main+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -5451,7 +5462,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_nsl_main" >&5
 $as_echo "$ac_cv_lib_nsl_main" >&6; }
-if test "x$ac_cv_lib_nsl_main" = x""yes; then :
+if test "x$ac_cv_lib_nsl_main" = xyes; then :
   have_nsl=yes
 
 else
@@ -5460,7 +5471,7 @@ fi
 
   { $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lcrypt" >&5
 $as_echo_n "checking for main in -lcrypt... " >&6; }
-if test "${ac_cv_lib_crypt_main+set}" = set; then :
+if ${ac_cv_lib_crypt_main+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -5488,7 +5499,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_crypt_main" >&5
 $as_echo "$ac_cv_lib_crypt_main" >&6; }
-if test "x$ac_cv_lib_crypt_main" = x""yes; then :
+if test "x$ac_cv_lib_crypt_main" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_LIBCRYPT 1
 _ACEOF
@@ -5499,7 +5510,7 @@ fi
 
   { $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lnss_files" >&5
 $as_echo_n "checking for main in -lnss_files... " >&6; }
-if test "${ac_cv_lib_nss_files_main+set}" = set; then :
+if ${ac_cv_lib_nss_files_main+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -5527,7 +5538,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_nss_files_main" >&5
 $as_echo "$ac_cv_lib_nss_files_main" >&6; }
-if test "x$ac_cv_lib_nss_files_main" = x""yes; then :
+if test "x$ac_cv_lib_nss_files_main" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_LIBNSS_FILES 1
 _ACEOF
@@ -5538,7 +5549,7 @@ fi
 
   { $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lnss_dns" >&5
 $as_echo_n "checking for main in -lnss_dns... " >&6; }
-if test "${ac_cv_lib_nss_dns_main+set}" = set; then :
+if ${ac_cv_lib_nss_dns_main+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -5566,7 +5577,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_nss_dns_main" >&5
 $as_echo "$ac_cv_lib_nss_dns_main" >&6; }
-if test "x$ac_cv_lib_nss_dns_main" = x""yes; then :
+if test "x$ac_cv_lib_nss_dns_main" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_LIBNSS_DNS 1
 _ACEOF
@@ -5577,7 +5588,7 @@ fi
 
   { $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lresolv" >&5
 $as_echo_n "checking for main in -lresolv... " >&6; }
-if test "${ac_cv_lib_resolv_main+set}" = set; then :
+if ${ac_cv_lib_resolv_main+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -5605,7 +5616,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_resolv_main" >&5
 $as_echo "$ac_cv_lib_resolv_main" >&6; }
-if test "x$ac_cv_lib_resolv_main" = x""yes; then :
+if test "x$ac_cv_lib_resolv_main" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_LIBRESOLV 1
 _ACEOF
@@ -5620,7 +5631,7 @@ if test "$yap_cv_readline" != "no"
 then
   { $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lreadline" >&5
 $as_echo_n "checking for main in -lreadline... " >&6; }
-if test "${ac_cv_lib_readline_main+set}" = set; then :
+if ${ac_cv_lib_readline_main+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -5648,7 +5659,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_readline_main" >&5
 $as_echo "$ac_cv_lib_readline_main" >&6; }
-if test "x$ac_cv_lib_readline_main" = x""yes; then :
+if test "x$ac_cv_lib_readline_main" = xyes; then :
 
 
 $as_echo "#define HAVE_LIBREADLINE 1" >>confdefs.h
@@ -5660,7 +5671,7 @@ else
                  { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
 $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
 as_fn_error $? "--with-readline was given, but test for readline failed
-See \`config.log' for more details" "$LINENO" 5 ; }
+See \`config.log' for more details" "$LINENO" 5; }
                fi
 
 fi
@@ -5670,7 +5681,7 @@ if test "$yap_cv_gmp" != "no"
 then
   { $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lgmp" >&5
 $as_echo_n "checking for main in -lgmp... " >&6; }
-if test "${ac_cv_lib_gmp_main+set}" = set; then :
+if ${ac_cv_lib_gmp_main+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -5698,7 +5709,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_gmp_main" >&5
 $as_echo "$ac_cv_lib_gmp_main" >&6; }
-if test "x$ac_cv_lib_gmp_main" = x""yes; then :
+if test "x$ac_cv_lib_gmp_main" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_LIBGMP 1
 _ACEOF
@@ -5712,7 +5723,7 @@ fi
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for zlibVersion in -lz" >&5
 $as_echo_n "checking for zlibVersion in -lz... " >&6; }
-if test "${ac_cv_lib_z_zlibVersion+set}" = set; then :
+if ${ac_cv_lib_z_zlibVersion+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -5746,7 +5757,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_z_zlibVersion" >&5
 $as_echo "$ac_cv_lib_z_zlibVersion" >&6; }
-if test "x$ac_cv_lib_z_zlibVersion" = x""yes; then :
+if test "x$ac_cv_lib_z_zlibVersion" = xyes; then :
   ZLIBS="-lz"
 	     ZLIB=yes
 else
@@ -5762,7 +5773,7 @@ if test "$yap_cv_myddas" != "no"
 then
 		{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lmysqlclient" >&5
 $as_echo_n "checking for main in -lmysqlclient... " >&6; }
-	if test "${yap_cv_mysql+set}" = set; then :
+	if ${yap_cv_mysql+:} false; then :
   $as_echo_n "(cached) " >&6
 else
 
@@ -5799,7 +5810,7 @@ $as_echo "$yap_cv_mysql" >&6; }
 
 		{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lodbc" >&5
 $as_echo_n "checking for main in -lodbc... " >&6; }
-	if test "${yap_cv_odbc+set}" = set; then :
+	if ${yap_cv_odbc+:} false; then :
   $as_echo_n "(cached) " >&6
 else
 
@@ -5860,7 +5871,7 @@ then
 
   { $as_echo "$as_me:${as_lineno-$LINENO}: checking for pthread_create in -lpthread" >&5
 $as_echo_n "checking for pthread_create in -lpthread... " >&6; }
-if test "${ac_cv_lib_pthread_pthread_create+set}" = set; then :
+if ${ac_cv_lib_pthread_pthread_create+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -5894,7 +5905,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_pthread_pthread_create" >&5
 $as_echo "$ac_cv_lib_pthread_pthread_create" >&6; }
-if test "x$ac_cv_lib_pthread_pthread_create" = x""yes; then :
+if test "x$ac_cv_lib_pthread_pthread_create" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_LIBPTHREAD 1
 _ACEOF
@@ -5915,7 +5926,7 @@ if test -n "$CPP" && test -d "$CPP"; then
   CPP=
 fi
 if test -z "$CPP"; then
-  if test "${ac_cv_prog_CPP+set}" = set; then :
+  if ${ac_cv_prog_CPP+:} false; then :
   $as_echo_n "(cached) " >&6
 else
       # Double quotes because CPP needs to be expanded
@@ -6031,7 +6042,7 @@ else
   { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
 $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
 as_fn_error $? "C preprocessor \"$CPP\" fails sanity check
-See \`config.log' for more details" "$LINENO" 5 ; }
+See \`config.log' for more details" "$LINENO" 5; }
 fi
 
 ac_ext=c
@@ -6043,7 +6054,7 @@ ac_compiler_gnu=$ac_cv_c_compiler_gnu
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for grep that handles long lines and -e" >&5
 $as_echo_n "checking for grep that handles long lines and -e... " >&6; }
-if test "${ac_cv_path_GREP+set}" = set; then :
+if ${ac_cv_path_GREP+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test -z "$GREP"; then
@@ -6106,7 +6117,7 @@ $as_echo "$ac_cv_path_GREP" >&6; }
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for egrep" >&5
 $as_echo_n "checking for egrep... " >&6; }
-if test "${ac_cv_path_EGREP+set}" = set; then :
+if ${ac_cv_path_EGREP+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if echo a | $GREP -E '(a|b)' >/dev/null 2>&1
@@ -6173,7 +6184,7 @@ $as_echo "$ac_cv_path_EGREP" >&6; }
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for ANSI C header files" >&5
 $as_echo_n "checking for ANSI C header files... " >&6; }
-if test "${ac_cv_header_stdc+set}" = set; then :
+if ${ac_cv_header_stdc+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   cat confdefs.h - <<_ACEOF >conftest.$ac_ext
@@ -6303,7 +6314,7 @@ done
 for ac_header in pthread.h
 do :
   ac_fn_c_check_header_mongrel "$LINENO" "pthread.h" "ac_cv_header_pthread_h" "$ac_includes_default"
-if test "x$ac_cv_header_pthread_h" = x""yes; then :
+if test "x$ac_cv_header_pthread_h" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_PTHREAD_H 1
 _ACEOF
@@ -6424,7 +6435,7 @@ then
   CC=${MPI_CC}
   { $as_echo "$as_me:${as_lineno-$LINENO}: checking for MPI_Init in -lmpi" >&5
 $as_echo_n "checking for MPI_Init in -lmpi... " >&6; }
-if test "${ac_cv_lib_mpi_MPI_Init+set}" = set; then :
+if ${ac_cv_lib_mpi_MPI_Init+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -6458,7 +6469,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_mpi_MPI_Init" >&5
 $as_echo "$ac_cv_lib_mpi_MPI_Init" >&6; }
-if test "x$ac_cv_lib_mpi_MPI_Init" = x""yes; then :
+if test "x$ac_cv_lib_mpi_MPI_Init" = xyes; then :
   $as_echo "#define HAVE_LIBMPI 1" >>confdefs.h
 
 else
@@ -6473,7 +6484,7 @@ fi
   else
     { $as_echo "$as_me:${as_lineno-$LINENO}: checking for MPI_Init in -lmpich" >&5
 $as_echo_n "checking for MPI_Init in -lmpich... " >&6; }
-if test "${ac_cv_lib_mpich_MPI_Init+set}" = set; then :
+if ${ac_cv_lib_mpich_MPI_Init+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -6507,7 +6518,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_mpich_MPI_Init" >&5
 $as_echo "$ac_cv_lib_mpich_MPI_Init" >&6; }
-if test "x$ac_cv_lib_mpich_MPI_Init" = x""yes; then :
+if test "x$ac_cv_lib_mpich_MPI_Init" = xyes; then :
   $as_echo "#define HAVE_LIBMPICH 1" >>confdefs.h
 
 else
@@ -6538,7 +6549,7 @@ then
   CC=${MPI_CC}
   { $as_echo "$as_me:${as_lineno-$LINENO}: checking for MPE_Init_log in -lmpe" >&5
 $as_echo_n "checking for MPE_Init_log in -lmpe... " >&6; }
-if test "${ac_cv_lib_mpe_MPE_Init_log+set}" = set; then :
+if ${ac_cv_lib_mpe_MPE_Init_log+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -6572,7 +6583,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_mpe_MPE_Init_log" >&5
 $as_echo "$ac_cv_lib_mpe_MPE_Init_log" >&6; }
-if test "x$ac_cv_lib_mpe_MPE_Init_log" = x""yes; then :
+if test "x$ac_cv_lib_mpe_MPE_Init_log" = xyes; then :
   $as_echo "#define HAVE_LIBMPE 1" >>confdefs.h
 
 else
@@ -6600,7 +6611,7 @@ if test -n "$CPP" && test -d "$CPP"; then
   CPP=
 fi
 if test -z "$CPP"; then
-  if test "${ac_cv_prog_CPP+set}" = set; then :
+  if ${ac_cv_prog_CPP+:} false; then :
   $as_echo_n "(cached) " >&6
 else
       # Double quotes because CPP needs to be expanded
@@ -6716,7 +6727,7 @@ else
   { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
 $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
 as_fn_error $? "C preprocessor \"$CPP\" fails sanity check
-See \`config.log' for more details" "$LINENO" 5 ; }
+See \`config.log' for more details" "$LINENO" 5; }
 fi
 
 ac_ext=c
@@ -6732,7 +6743,7 @@ then
 else
   { $as_echo "$as_me:${as_lineno-$LINENO}: checking for sys/wait.h that is POSIX.1 compatible" >&5
 $as_echo_n "checking for sys/wait.h that is POSIX.1 compatible... " >&6; }
-if test "${ac_cv_header_sys_wait_h+set}" = set; then :
+if ${ac_cv_header_sys_wait_h+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   cat confdefs.h - <<_ACEOF >conftest.$ac_ext
@@ -6773,14 +6784,14 @@ fi
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for restartable system calls" >&5
 $as_echo_n "checking for restartable system calls... " >&6; }
-if test "${ac_cv_sys_restartable_syscalls+set}" = set; then :
+if ${ac_cv_sys_restartable_syscalls+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if test "$cross_compiling" = yes; then :
   { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
 $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
 as_fn_error $? "cannot run test program while cross compiling
-See \`config.log' for more details" "$LINENO" 5 ; }
+See \`config.log' for more details" "$LINENO" 5; }
 else
   cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
@@ -6862,7 +6873,7 @@ case "$target_os" in
         then
 	  { $as_echo "$as_me:${as_lineno-$LINENO}: checking for dlopen in -ldl" >&5
 $as_echo_n "checking for dlopen in -ldl... " >&6; }
-if test "${ac_cv_lib_dl_dlopen+set}" = set; then :
+if ${ac_cv_lib_dl_dlopen+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -6896,7 +6907,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_dl_dlopen" >&5
 $as_echo "$ac_cv_lib_dl_dlopen" >&6; }
-if test "x$ac_cv_lib_dl_dlopen" = x""yes; then :
+if test "x$ac_cv_lib_dl_dlopen" = xyes; then :
   have_dl=yes
 
 else
@@ -7028,7 +7039,7 @@ fi
         then
 	  { $as_echo "$as_me:${as_lineno-$LINENO}: checking for dlopen in -ldl" >&5
 $as_echo_n "checking for dlopen in -ldl... " >&6; }
-if test "${ac_cv_lib_dl_dlopen+set}" = set; then :
+if ${ac_cv_lib_dl_dlopen+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -7062,7 +7073,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_dl_dlopen" >&5
 $as_echo "$ac_cv_lib_dl_dlopen" >&6; }
-if test "x$ac_cv_lib_dl_dlopen" = x""yes; then :
+if test "x$ac_cv_lib_dl_dlopen" = xyes; then :
   	     have_dl=yes
 
 else
@@ -7100,7 +7111,7 @@ fi
 	then
 	  { $as_echo "$as_me:${as_lineno-$LINENO}: checking for dlopen in -ldl" >&5
 $as_echo_n "checking for dlopen in -ldl... " >&6; }
-if test "${ac_cv_lib_dl_dlopen+set}" = set; then :
+if ${ac_cv_lib_dl_dlopen+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -7134,7 +7145,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_dl_dlopen" >&5
 $as_echo "$ac_cv_lib_dl_dlopen" >&6; }
-if test "x$ac_cv_lib_dl_dlopen" = x""yes; then :
+if test "x$ac_cv_lib_dl_dlopen" = xyes; then :
   have_dl=yes
 
 else
@@ -7251,7 +7262,7 @@ fi
       *)
 	{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for dlopen in -ldl" >&5
 $as_echo_n "checking for dlopen in -ldl... " >&6; }
-if test "${ac_cv_lib_dl_dlopen+set}" = set; then :
+if ${ac_cv_lib_dl_dlopen+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -7285,7 +7296,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_dl_dlopen" >&5
 $as_echo "$ac_cv_lib_dl_dlopen" >&6; }
-if test "x$ac_cv_lib_dl_dlopen" = x""yes; then :
+if test "x$ac_cv_lib_dl_dlopen" = xyes; then :
   have_dl=yes
 
 else
@@ -7446,7 +7457,7 @@ fi
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for zlibVersion in -lz" >&5
 $as_echo_n "checking for zlibVersion in -lz... " >&6; }
-if test "${ac_cv_lib_z_zlibVersion+set}" = set; then :
+if ${ac_cv_lib_z_zlibVersion+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -7480,7 +7491,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_z_zlibVersion" >&5
 $as_echo "$ac_cv_lib_z_zlibVersion" >&6; }
-if test "x$ac_cv_lib_z_zlibVersion" = x""yes; then :
+if test "x$ac_cv_lib_z_zlibVersion" = xyes; then :
   ZLIBS="-lz"
 	     ZLIB=yes
 else
@@ -7516,7 +7527,7 @@ OLD_CC=${CC}
 CC=${LAM_MPI_CC}
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -llam" >&5
 $as_echo_n "checking for main in -llam... " >&6; }
-if test "${ac_cv_lib_lam_main+set}" = set; then :
+if ${ac_cv_lib_lam_main+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -7544,7 +7555,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_lam_main" >&5
 $as_echo "$ac_cv_lib_lam_main" >&6; }
-if test "x$ac_cv_lib_lam_main" = x""yes; then :
+if test "x$ac_cv_lib_lam_main" = xyes; then :
   LAMOBJS=yap_mpi."$SO"
 else
   LAMOBJS=no
@@ -7554,7 +7565,7 @@ CC=${OLD_CC}
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for ANSI C header files" >&5
 $as_echo_n "checking for ANSI C header files... " >&6; }
-if test "${ac_cv_header_stdc+set}" = set; then :
+if ${ac_cv_header_stdc+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   cat confdefs.h - <<_ACEOF >conftest.$ac_ext
@@ -7666,7 +7677,7 @@ fi
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for sys/wait.h that is POSIX.1 compatible" >&5
 $as_echo_n "checking for sys/wait.h that is POSIX.1 compatible... " >&6; }
-if test "${ac_cv_header_sys_wait_h+set}" = set; then :
+if ${ac_cv_header_sys_wait_h+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   cat confdefs.h - <<_ACEOF >conftest.$ac_ext
@@ -7903,7 +7914,7 @@ done
 for ac_header in mach-o/dyld.h
 do :
   ac_fn_c_check_header_mongrel "$LINENO" "mach-o/dyld.h" "ac_cv_header_mach_o_dyld_h" "$ac_includes_default"
-if test "x$ac_cv_header_mach_o_dyld_h" = x""yes; then :
+if test "x$ac_cv_header_mach_o_dyld_h" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_MACH_O_DYLD_H 1
 _ACEOF
@@ -7917,7 +7928,7 @@ then
   for ac_header in gmp.h
 do :
   ac_fn_c_check_header_mongrel "$LINENO" "gmp.h" "ac_cv_header_gmp_h" "$ac_includes_default"
-if test "x$ac_cv_header_gmp_h" = x""yes; then :
+if test "x$ac_cv_header_gmp_h" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_GMP_H 1
 _ACEOF
@@ -7932,7 +7943,7 @@ then
   for ac_header in cudd.h
 do :
   ac_fn_c_check_header_mongrel "$LINENO" "cudd.h" "ac_cv_header_cudd_h" "$ac_includes_default"
-if test "x$ac_cv_header_cudd_h" = x""yes; then :
+if test "x$ac_cv_header_cudd_h" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_CUDD_H 1
 _ACEOF
@@ -7947,7 +7958,7 @@ then
   for ac_header in mysql/mysql.h
 do :
   ac_fn_c_check_header_mongrel "$LINENO" "mysql/mysql.h" "ac_cv_header_mysql_mysql_h" "$ac_includes_default"
-if test "x$ac_cv_header_mysql_mysql_h" = x""yes; then :
+if test "x$ac_cv_header_mysql_mysql_h" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_MYSQL_MYSQL_H 1
 _ACEOF
@@ -7962,7 +7973,7 @@ then
   for ac_header in readline/readline.h
 do :
   ac_fn_c_check_header_mongrel "$LINENO" "readline/readline.h" "ac_cv_header_readline_readline_h" "$ac_includes_default"
-if test "x$ac_cv_header_readline_readline_h" = x""yes; then :
+if test "x$ac_cv_header_readline_readline_h" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_READLINE_READLINE_H 1
 _ACEOF
@@ -7974,7 +7985,7 @@ done
   for ac_header in readline/history.h
 do :
   ac_fn_c_check_header_mongrel "$LINENO" "readline/history.h" "ac_cv_header_readline_history_h" "$ac_includes_default"
-if test "x$ac_cv_header_readline_history_h" = x""yes; then :
+if test "x$ac_cv_header_readline_history_h" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_READLINE_HISTORY_H 1
 _ACEOF
@@ -7999,7 +8010,7 @@ fi
 for ac_header in mpi.h
 do :
   ac_fn_c_check_header_mongrel "$LINENO" "mpi.h" "ac_cv_header_mpi_h" "$ac_includes_default"
-if test "x$ac_cv_header_mpi_h" = x""yes; then :
+if test "x$ac_cv_header_mpi_h" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_MPI_H 1
 _ACEOF
@@ -8011,7 +8022,7 @@ done
 for ac_header in mpe.h
 do :
   ac_fn_c_check_header_mongrel "$LINENO" "mpe.h" "ac_cv_header_mpe_h" "$ac_includes_default"
-if test "x$ac_cv_header_mpe_h" = x""yes; then :
+if test "x$ac_cv_header_mpe_h" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_MPE_H 1
 _ACEOF
@@ -8023,7 +8034,7 @@ done
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for inline" >&5
 $as_echo_n "checking for inline... " >&6; }
-if test "${ac_cv_c_inline+set}" = set; then :
+if ${ac_cv_c_inline+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_cv_c_inline=no
@@ -8065,7 +8076,7 @@ esac
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether struct tm is in sys/time.h or time.h" >&5
 $as_echo_n "checking whether struct tm is in sys/time.h or time.h... " >&6; }
-if test "${ac_cv_struct_tm+set}" = set; then :
+if ${ac_cv_struct_tm+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   cat confdefs.h - <<_ACEOF >conftest.$ac_ext
@@ -8104,7 +8115,7 @@ fi
 # This bug is HP SR number 8606223364.
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking size of int *" >&5
 $as_echo_n "checking size of int *... " >&6; }
-if test "${ac_cv_sizeof_int_p+set}" = set; then :
+if ${ac_cv_sizeof_int_p+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if ac_fn_c_compute_int "$LINENO" "(long int) (sizeof (int *))" "ac_cv_sizeof_int_p"        "$ac_includes_default"; then :
@@ -8114,7 +8125,7 @@ else
      { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
 $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
 as_fn_error 77 "cannot compute sizeof (int *)
-See \`config.log' for more details" "$LINENO" 5 ; }
+See \`config.log' for more details" "$LINENO" 5; }
    else
      ac_cv_sizeof_int_p=0
    fi
@@ -8137,7 +8148,7 @@ _ACEOF
 # This bug is HP SR number 8606223364.
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking size of short int" >&5
 $as_echo_n "checking size of short int... " >&6; }
-if test "${ac_cv_sizeof_short_int+set}" = set; then :
+if ${ac_cv_sizeof_short_int+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if ac_fn_c_compute_int "$LINENO" "(long int) (sizeof (short int))" "ac_cv_sizeof_short_int"        "$ac_includes_default"; then :
@@ -8147,7 +8158,7 @@ else
      { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
 $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
 as_fn_error 77 "cannot compute sizeof (short int)
-See \`config.log' for more details" "$LINENO" 5 ; }
+See \`config.log' for more details" "$LINENO" 5; }
    else
      ac_cv_sizeof_short_int=0
    fi
@@ -8170,7 +8181,7 @@ _ACEOF
 # This bug is HP SR number 8606223364.
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking size of int" >&5
 $as_echo_n "checking size of int... " >&6; }
-if test "${ac_cv_sizeof_int+set}" = set; then :
+if ${ac_cv_sizeof_int+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if ac_fn_c_compute_int "$LINENO" "(long int) (sizeof (int))" "ac_cv_sizeof_int"        "$ac_includes_default"; then :
@@ -8180,7 +8191,7 @@ else
      { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
 $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
 as_fn_error 77 "cannot compute sizeof (int)
-See \`config.log' for more details" "$LINENO" 5 ; }
+See \`config.log' for more details" "$LINENO" 5; }
    else
      ac_cv_sizeof_int=0
    fi
@@ -8203,7 +8214,7 @@ _ACEOF
 # This bug is HP SR number 8606223364.
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking size of long int" >&5
 $as_echo_n "checking size of long int... " >&6; }
-if test "${ac_cv_sizeof_long_int+set}" = set; then :
+if ${ac_cv_sizeof_long_int+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if ac_fn_c_compute_int "$LINENO" "(long int) (sizeof (long int))" "ac_cv_sizeof_long_int"        "$ac_includes_default"; then :
@@ -8213,7 +8224,7 @@ else
      { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
 $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
 as_fn_error 77 "cannot compute sizeof (long int)
-See \`config.log' for more details" "$LINENO" 5 ; }
+See \`config.log' for more details" "$LINENO" 5; }
    else
      ac_cv_sizeof_long_int=0
    fi
@@ -8236,7 +8247,7 @@ _ACEOF
 # This bug is HP SR number 8606223364.
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking size of long long int" >&5
 $as_echo_n "checking size of long long int... " >&6; }
-if test "${ac_cv_sizeof_long_long_int+set}" = set; then :
+if ${ac_cv_sizeof_long_long_int+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if ac_fn_c_compute_int "$LINENO" "(long int) (sizeof (long long int))" "ac_cv_sizeof_long_long_int"        "$ac_includes_default"; then :
@@ -8246,7 +8257,7 @@ else
      { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
 $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
 as_fn_error 77 "cannot compute sizeof (long long int)
-See \`config.log' for more details" "$LINENO" 5 ; }
+See \`config.log' for more details" "$LINENO" 5; }
    else
      ac_cv_sizeof_long_long_int=0
    fi
@@ -8269,7 +8280,7 @@ _ACEOF
 # This bug is HP SR number 8606223364.
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking size of float" >&5
 $as_echo_n "checking size of float... " >&6; }
-if test "${ac_cv_sizeof_float+set}" = set; then :
+if ${ac_cv_sizeof_float+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if ac_fn_c_compute_int "$LINENO" "(long int) (sizeof (float))" "ac_cv_sizeof_float"        "$ac_includes_default"; then :
@@ -8279,7 +8290,7 @@ else
      { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
 $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
 as_fn_error 77 "cannot compute sizeof (float)
-See \`config.log' for more details" "$LINENO" 5 ; }
+See \`config.log' for more details" "$LINENO" 5; }
    else
      ac_cv_sizeof_float=0
    fi
@@ -8302,7 +8313,7 @@ _ACEOF
 # This bug is HP SR number 8606223364.
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking size of double" >&5
 $as_echo_n "checking size of double... " >&6; }
-if test "${ac_cv_sizeof_double+set}" = set; then :
+if ${ac_cv_sizeof_double+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   if ac_fn_c_compute_int "$LINENO" "(long int) (sizeof (double))" "ac_cv_sizeof_double"        "$ac_includes_default"; then :
@@ -8312,7 +8323,7 @@ else
      { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
 $as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
 as_fn_error 77 "cannot compute sizeof (double)
-See \`config.log' for more details" "$LINENO" 5 ; }
+See \`config.log' for more details" "$LINENO" 5; }
    else
      ac_cv_sizeof_double=0
    fi
@@ -8332,7 +8343,7 @@ _ACEOF
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for type of malloc" >&5
 $as_echo_n "checking for type of malloc... " >&6; }
-if test "${yap_cv_malloct+set}" = set; then :
+if ${yap_cv_malloct+:} false; then :
   $as_echo_n "(cached) " >&6
 else
 
@@ -8372,7 +8383,7 @@ fi
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for gcc inline" >&5
 $as_echo_n "checking for gcc inline... " >&6; }
-if test "${yap_cv_gcc+set}" = set; then :
+if ${yap_cv_gcc+:} false; then :
   $as_echo_n "(cached) " >&6
 else
 
@@ -8481,7 +8492,7 @@ fi
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for gcc threaded code" >&5
 $as_echo_n "checking for gcc threaded code... " >&6; }
-if test "${yap_cv_threaded_code+set}" = set; then :
+if ${yap_cv_threaded_code+:} false; then :
   $as_echo_n "(cached) " >&6
 else
 
@@ -8526,7 +8537,7 @@ fi
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for IEEE floats" >&5
 $as_echo_n "checking for IEEE floats... " >&6; }
-if test "${yap_cv_ffieee+set}" = set; then :
+if ${yap_cv_ffieee+:} false; then :
   $as_echo_n "(cached) " >&6
 else
 
@@ -8567,7 +8578,7 @@ fi
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for sigsetjmp" >&5
 $as_echo_n "checking for sigsetjmp... " >&6; }
-if test "${yap_cv_sigsetjmp+set}" = set; then :
+if ${yap_cv_sigsetjmp+:} false; then :
   $as_echo_n "(cached) " >&6
 else
 
@@ -8607,7 +8618,7 @@ fi
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for sigsegv" >&5
 $as_echo_n "checking for sigsegv... " >&6; }
-if test "${yap_cv_sigsegv+set}" = set; then :
+if ${yap_cv_sigsegv+:} false; then :
   $as_echo_n "(cached) " >&6
 else
 
@@ -8646,7 +8657,7 @@ fi
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for sigprof" >&5
 $as_echo_n "checking for sigprof... " >&6; }
-if test "${yap_cv_sigprof+set}" = set; then :
+if ${yap_cv_sigprof+:} false; then :
   $as_echo_n "(cached) " >&6
 else
 
@@ -8685,7 +8696,7 @@ fi
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for siginfo" >&5
 $as_echo_n "checking for siginfo... " >&6; }
-if test "${yap_cv_siginfo+set}" = set; then :
+if ${yap_cv_siginfo+:} false; then :
   $as_echo_n "(cached) " >&6
 else
 
@@ -8786,7 +8797,7 @@ fi
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking return type of signal handlers" >&5
 $as_echo_n "checking return type of signal handlers... " >&6; }
-if test "${ac_cv_type_signal+set}" = set; then :
+if ${ac_cv_type_signal+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   cat confdefs.h - <<_ACEOF >conftest.$ac_ext
@@ -8928,7 +8939,7 @@ done
 for ac_func in mbscoll
 do :
   ac_fn_c_check_func "$LINENO" "mbscoll" "ac_cv_func_mbscoll"
-if test "x$ac_cv_func_mbscoll" = x""yes; then :
+if test "x$ac_cv_func_mbscoll" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_MBSCOLL 1
 _ACEOF
@@ -8939,7 +8950,7 @@ done
 for ac_func in mbscasecoll
 do :
   ac_fn_c_check_func "$LINENO" "mbscasecoll" "ac_cv_func_mbscasecoll"
-if test "x$ac_cv_func_mbscasecoll" = x""yes; then :
+if test "x$ac_cv_func_mbscasecoll" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_MBSCASECOLL 1
 _ACEOF
@@ -8950,7 +8961,7 @@ done
 for ac_func in mbsnrtowcs
 do :
   ac_fn_c_check_func "$LINENO" "mbsnrtowcs" "ac_cv_func_mbsnrtowcs"
-if test "x$ac_cv_func_mbsnrtowcs" = x""yes; then :
+if test "x$ac_cv_func_mbsnrtowcs" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_MBSNRTOWCS 1
 _ACEOF
@@ -9068,7 +9079,7 @@ done
 
 
 ac_fn_c_check_func "$LINENO" "regexec" "ac_cv_func_regexec"
-if test "x$ac_cv_func_regexec" = x""yes; then :
+if test "x$ac_cv_func_regexec" = xyes; then :
   NO_BUILTIN_REGEXP="#"
 else
   NO_BUILTIN_REGEXP=""
@@ -9078,7 +9089,7 @@ fi
 for ac_func in NSLinkModule
 do :
   ac_fn_c_check_func "$LINENO" "NSLinkModule" "ac_cv_func_NSLinkModule"
-if test "x$ac_cv_func_NSLinkModule" = x""yes; then :
+if test "x$ac_cv_func_NSLinkModule" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_NSLINKMODULE 1
 _ACEOF
@@ -9121,7 +9132,7 @@ fi
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for mpz_xor" >&5
 $as_echo_n "checking for mpz_xor... " >&6; }
-if test "${yap_cv_mpz_xor+set}" = set; then :
+if ${yap_cv_mpz_xor+:} false; then :
   $as_echo_n "(cached) " >&6
 else
 
@@ -9167,7 +9178,7 @@ fi
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking if fflush(NULL) clobbers input pipes" >&5
 $as_echo_n "checking if fflush(NULL) clobbers input pipes... " >&6; }
-if test "${yap_cv_broken_fflush_null+set}" = set; then :
+if ${yap_cv_broken_fflush_null+:} false; then :
   $as_echo_n "(cached) " >&6
 else
    cat >conftest.$ac_ext <<EOF
@@ -9278,13 +9289,13 @@ CLIB_PLTARGETS="unix.pl $CLIB_PLTARGETS"
 CLIB_NETLIBS=
 else
 ac_fn_c_check_func "$LINENO" "socket" "ac_cv_func_socket"
-if test "x$ac_cv_func_socket" = x""yes; then :
+if test "x$ac_cv_func_socket" = xyes; then :
 
 else
 
              { $as_echo "$as_me:${as_lineno-$LINENO}: checking for socket in -lsocket" >&5
 $as_echo_n "checking for socket in -lsocket... " >&6; }
-if test "${ac_cv_lib_socket_socket+set}" = set; then :
+if ${ac_cv_lib_socket_socket+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -9318,7 +9329,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_socket_socket" >&5
 $as_echo "$ac_cv_lib_socket_socket" >&6; }
-if test "x$ac_cv_lib_socket_socket" = x""yes; then :
+if test "x$ac_cv_lib_socket_socket" = xyes; then :
   CLIB_NETLIBS="$CLIB_NETLIBS -lsocket"
 
 $as_echo "#define HAVE_LIBSOCKET 1" >>confdefs.h
@@ -9328,13 +9339,13 @@ fi
 fi
 
 ac_fn_c_check_func "$LINENO" "gethostent" "ac_cv_func_gethostent"
-if test "x$ac_cv_func_gethostent" = x""yes; then :
+if test "x$ac_cv_func_gethostent" = xyes; then :
 
 else
 
              { $as_echo "$as_me:${as_lineno-$LINENO}: checking for gethostent in -lnsl" >&5
 $as_echo_n "checking for gethostent in -lnsl... " >&6; }
-if test "${ac_cv_lib_nsl_gethostent+set}" = set; then :
+if ${ac_cv_lib_nsl_gethostent+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -9368,7 +9379,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_nsl_gethostent" >&5
 $as_echo "$ac_cv_lib_nsl_gethostent" >&6; }
-if test "x$ac_cv_lib_nsl_gethostent" = x""yes; then :
+if test "x$ac_cv_lib_nsl_gethostent" = xyes; then :
   CLIB_NETLIBS="$CLIB_NETLIBS -lnsl"
 
 $as_echo "#define HAVE_LIBNSL 1" >>confdefs.h
@@ -9381,7 +9392,7 @@ fi
 
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for pthread_create in -lpthread" >&5
 $as_echo_n "checking for pthread_create in -lpthread... " >&6; }
-if test "${ac_cv_lib_pthread_pthread_create+set}" = set; then :
+if ${ac_cv_lib_pthread_pthread_create+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -9415,7 +9426,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_pthread_pthread_create" >&5
 $as_echo "$ac_cv_lib_pthread_pthread_create" >&6; }
-if test "x$ac_cv_lib_pthread_pthread_create" = x""yes; then :
+if test "x$ac_cv_lib_pthread_pthread_create" = xyes; then :
   CLIB_PTHREADS="-lpthread"
 else
   CLIB_PTHREADS=""
@@ -9425,7 +9436,7 @@ fi
 oldlibs="$LIBS"
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for crypt in -lcrypt" >&5
 $as_echo_n "checking for crypt in -lcrypt... " >&6; }
-if test "${ac_cv_lib_crypt_crypt+set}" = set; then :
+if ${ac_cv_lib_crypt_crypt+:} false; then :
   $as_echo_n "(cached) " >&6
 else
   ac_check_lib_save_LIBS=$LIBS
@@ -9459,7 +9470,7 @@ LIBS=$ac_check_lib_save_LIBS
 fi
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_crypt_crypt" >&5
 $as_echo "$ac_cv_lib_crypt_crypt" >&6; }
-if test "x$ac_cv_lib_crypt_crypt" = x""yes; then :
+if test "x$ac_cv_lib_crypt_crypt" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_LIBCRYPT 1
 _ACEOF
@@ -9472,7 +9483,7 @@ CLIB_CRYPTLIBS="$LIBS"
 for ac_func in crypt
 do :
   ac_fn_c_check_func "$LINENO" "crypt" "ac_cv_func_crypt"
-if test "x$ac_cv_func_crypt" = x""yes; then :
+if test "x$ac_cv_func_crypt" = xyes; then :
   cat >>confdefs.h <<_ACEOF
 #define HAVE_CRYPT 1
 _ACEOF
@@ -9493,7 +9504,7 @@ ac_fn_c_check_type "$LINENO" "socklen_t" "ac_cv_type_socklen_t" "
 #include <sys/socket.h>
 
 "
-if test "x$ac_cv_type_socklen_t" = x""yes; then :
+if test "x$ac_cv_type_socklen_t" = xyes; then :
 
 cat >>confdefs.h <<_ACEOF
 #define HAVE_SOCKLEN_T 1
@@ -9507,7 +9518,7 @@ ac_fn_c_check_type "$LINENO" "ssize_t" "ac_cv_type_ssize_t" "
 #include <sys/socket.h>
 
 "
-if test "x$ac_cv_type_ssize_t" = x""yes; then :
+if test "x$ac_cv_type_ssize_t" = xyes; then :
 
 cat >>confdefs.h <<_ACEOF
 #define HAVE_SSIZE_T 1
@@ -9562,7 +9573,7 @@ fi
 
 ac_fn_c_check_member "$LINENO" "struct tm" "tm_gmtoff" "ac_cv_member_struct_tm_tm_gmtoff" "#include <time.h>
 "
-if test "x$ac_cv_member_struct_tm_tm_gmtoff" = x""yes; then :
+if test "x$ac_cv_member_struct_tm_tm_gmtoff" = xyes; then :
 
 $as_echo "#define HAVE_STRUCT_TIME_TM_GMTOFF /**/" >>confdefs.h
 
@@ -9662,6 +9673,7 @@ mkdir -p  packages/PLStream/libtai
 mkdir -p  packages/plunit
 mkdir -p  packages/ProbLog
 mkdir -p  packages/ProbLog/simplecudd
+mkdir -p  packages/R
 mkdir -p  packages/RDF
 mkdir -p  packages/semweb
 mkdir -p  packages/sgml
@@ -9727,6 +9739,8 @@ ac_config_files="$ac_config_files packages/plunit/Makefile"
 
 ac_config_files="$ac_config_files packages/ProbLog/Makefile"
 
+ac_config_files="$ac_config_files packages/R/Makefile"
+
 ac_config_files="$ac_config_files packages/RDF/Makefile"
 
 ac_config_files="$ac_config_files packages/semweb/Makefile"
@@ -9827,10 +9841,21 @@ $as_echo "$as_me: WARNING: cache variable $ac_var contains a newline" >&2;} ;;
      :end' >>confcache
 if diff "$cache_file" confcache >/dev/null 2>&1; then :; else
   if test -w "$cache_file"; then
-    test "x$cache_file" != "x/dev/null" &&
+    if test "x$cache_file" != "x/dev/null"; then
       { $as_echo "$as_me:${as_lineno-$LINENO}: updating cache $cache_file" >&5
 $as_echo "$as_me: updating cache $cache_file" >&6;}
-    cat confcache >$cache_file
+      if test ! -f "$cache_file" || test -h "$cache_file"; then
+	cat confcache >"$cache_file"
+      else
+        case $cache_file in #(
+        */* | ?:*)
+	  mv -f confcache "$cache_file"$$ &&
+	  mv -f "$cache_file"$$ "$cache_file" ;; #(
+        *)
+	  mv -f confcache "$cache_file" ;;
+	esac
+      fi
+    fi
   else
     { $as_echo "$as_me:${as_lineno-$LINENO}: not updating unwritable cache $cache_file" >&5
 $as_echo "$as_me: not updating unwritable cache $cache_file" >&6;}
@@ -9862,7 +9887,7 @@ LTLIBOBJS=$ac_ltlibobjs
 
 
 
-: ${CONFIG_STATUS=./config.status}
+: "${CONFIG_STATUS=./config.status}"
 ac_write_fail=0
 ac_clean_files_save=$ac_clean_files
 ac_clean_files="$ac_clean_files $CONFIG_STATUS"
@@ -9963,6 +9988,7 @@ fi
 IFS=" ""	$as_nl"
 
 # Find who we are.  Look in the path if we contain no directory separator.
+as_myself=
 case $0 in #((
   *[\\/]* ) as_myself=$0 ;;
   *) as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
@@ -10270,7 +10296,7 @@ cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
 # values after options handling.
 ac_log="
 This file was extended by $as_me, which was
-generated by GNU Autoconf 2.67.  Invocation command line was
+generated by GNU Autoconf 2.68.  Invocation command line was
 
   CONFIG_FILES    = $CONFIG_FILES
   CONFIG_HEADERS  = $CONFIG_HEADERS
@@ -10332,7 +10358,7 @@ cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
 ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`"
 ac_cs_version="\\
 config.status
-configured by $0, generated by GNU Autoconf 2.67,
+configured by $0, generated by GNU Autoconf 2.68,
   with options \\"\$ac_cs_config\\"
 
 Copyright (C) 2010 Free Software Foundation, Inc.
@@ -10485,6 +10511,7 @@ do
     "packages/PLStream/libtai/Makefile") CONFIG_FILES="$CONFIG_FILES packages/PLStream/libtai/Makefile" ;;
     "packages/plunit/Makefile") CONFIG_FILES="$CONFIG_FILES packages/plunit/Makefile" ;;
     "packages/ProbLog/Makefile") CONFIG_FILES="$CONFIG_FILES packages/ProbLog/Makefile" ;;
+    "packages/R/Makefile") CONFIG_FILES="$CONFIG_FILES packages/R/Makefile" ;;
     "packages/RDF/Makefile") CONFIG_FILES="$CONFIG_FILES packages/RDF/Makefile" ;;
     "packages/semweb/Makefile") CONFIG_FILES="$CONFIG_FILES packages/semweb/Makefile" ;;
     "packages/sgml/Makefile") CONFIG_FILES="$CONFIG_FILES packages/sgml/Makefile" ;;
@@ -10499,7 +10526,7 @@ do
     "packages/swi-minisat2/Makefile") CONFIG_FILES="$CONFIG_FILES packages/swi-minisat2/Makefile" ;;
     "packages/swi-minisat2/C/Makefile") CONFIG_FILES="$CONFIG_FILES packages/swi-minisat2/C/Makefile" ;;
 
-  *) as_fn_error $? "invalid argument: \`$ac_config_target'" "$LINENO" 5 ;;
+  *) as_fn_error $? "invalid argument: \`$ac_config_target'" "$LINENO" 5;;
   esac
 done
 
@@ -10521,9 +10548,10 @@ fi
 # after its creation but before its name has been assigned to `$tmp'.
 $debug ||
 {
-  tmp=
+  tmp= ac_tmp=
   trap 'exit_status=$?
-  { test -z "$tmp" || test ! -d "$tmp" || rm -fr "$tmp"; } && exit $exit_status
+  : "${ac_tmp:=$tmp}"
+  { test ! -d "$ac_tmp" || rm -fr "$ac_tmp"; } && exit $exit_status
 ' 0
   trap 'as_fn_exit 1' 1 2 13 15
 }
@@ -10531,12 +10559,13 @@ $debug ||
 
 {
   tmp=`(umask 077 && mktemp -d "./confXXXXXX") 2>/dev/null` &&
-  test -n "$tmp" && test -d "$tmp"
+  test -d "$tmp"
 }  ||
 {
   tmp=./conf$$-$RANDOM
   (umask 077 && mkdir "$tmp")
 } || as_fn_error $? "cannot create a temporary directory in ." "$LINENO" 5
+ac_tmp=$tmp
 
 # Set up the scripts for CONFIG_FILES section.
 # No need to generate them if there are no CONFIG_FILES.
@@ -10558,7 +10587,7 @@ else
   ac_cs_awk_cr=$ac_cr
 fi
 
-echo 'BEGIN {' >"$tmp/subs1.awk" &&
+echo 'BEGIN {' >"$ac_tmp/subs1.awk" &&
 _ACEOF
 
 
@@ -10586,7 +10615,7 @@ done
 rm -f conf$$subs.sh
 
 cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
-cat >>"\$tmp/subs1.awk" <<\\_ACAWK &&
+cat >>"\$ac_tmp/subs1.awk" <<\\_ACAWK &&
 _ACEOF
 sed -n '
 h
@@ -10634,7 +10663,7 @@ t delim
 rm -f conf$$subs.awk
 cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
 _ACAWK
-cat >>"\$tmp/subs1.awk" <<_ACAWK &&
+cat >>"\$ac_tmp/subs1.awk" <<_ACAWK &&
   for (key in S) S_is_set[key] = 1
   FS = ""
 
@@ -10666,7 +10695,7 @@ if sed "s/$ac_cr//" < /dev/null > /dev/null 2>&1; then
   sed "s/$ac_cr\$//; s/$ac_cr/$ac_cs_awk_cr/g"
 else
   cat
-fi < "$tmp/subs1.awk" > "$tmp/subs.awk" \
+fi < "$ac_tmp/subs1.awk" > "$ac_tmp/subs.awk" \
   || as_fn_error $? "could not setup config files machinery" "$LINENO" 5
 _ACEOF
 
@@ -10700,7 +10729,7 @@ fi # test -n "$CONFIG_FILES"
 # No need to generate them if there are no CONFIG_HEADERS.
 # This happens for instance with `./config.status Makefile'.
 if test -n "$CONFIG_HEADERS"; then
-cat >"$tmp/defines.awk" <<\_ACAWK ||
+cat >"$ac_tmp/defines.awk" <<\_ACAWK ||
 BEGIN {
 _ACEOF
 
@@ -10712,8 +10741,8 @@ _ACEOF
 # handling of long lines.
 ac_delim='%!_!# '
 for ac_last_try in false false :; do
-  ac_t=`sed -n "/$ac_delim/p" confdefs.h`
-  if test -z "$ac_t"; then
+  ac_tt=`sed -n "/$ac_delim/p" confdefs.h`
+  if test -z "$ac_tt"; then
     break
   elif $ac_last_try; then
     as_fn_error $? "could not make $CONFIG_HEADERS" "$LINENO" 5
@@ -10814,7 +10843,7 @@ do
   esac
   case $ac_mode$ac_tag in
   :[FHL]*:*);;
-  :L* | :C*:*) as_fn_error $? "invalid tag \`$ac_tag'" "$LINENO" 5 ;;
+  :L* | :C*:*) as_fn_error $? "invalid tag \`$ac_tag'" "$LINENO" 5;;
   :[FH]-) ac_tag=-:-;;
   :[FH]*) ac_tag=$ac_tag:$ac_tag.in;;
   esac
@@ -10833,7 +10862,7 @@ do
     for ac_f
     do
       case $ac_f in
-      -) ac_f="$tmp/stdin";;
+      -) ac_f="$ac_tmp/stdin";;
       *) # Look for the file first in the build tree, then in the source tree
 	 # (if the path is not absolute).  The absolute path cannot be DOS-style,
 	 # because $ac_f cannot contain `:'.
@@ -10842,7 +10871,7 @@ do
 	   [\\/$]*) false;;
 	   *) test -f "$srcdir/$ac_f" && ac_f="$srcdir/$ac_f";;
 	   esac ||
-	   as_fn_error 1 "cannot find input file: \`$ac_f'" "$LINENO" 5 ;;
+	   as_fn_error 1 "cannot find input file: \`$ac_f'" "$LINENO" 5;;
       esac
       case $ac_f in *\'*) ac_f=`$as_echo "$ac_f" | sed "s/'/'\\\\\\\\''/g"`;; esac
       as_fn_append ac_file_inputs " '$ac_f'"
@@ -10868,8 +10897,8 @@ $as_echo "$as_me: creating $ac_file" >&6;}
     esac
 
     case $ac_tag in
-    *:-:* | *:-) cat >"$tmp/stdin" \
-      || as_fn_error $? "could not create $ac_file" "$LINENO" 5  ;;
+    *:-:* | *:-) cat >"$ac_tmp/stdin" \
+      || as_fn_error $? "could not create $ac_file" "$LINENO" 5 ;;
     esac
     ;;
   esac
@@ -10999,21 +11028,22 @@ s&@abs_top_builddir@&$ac_abs_top_builddir&;t t
 s&@INSTALL@&$ac_INSTALL&;t t
 $ac_datarootdir_hack
 "
-eval sed \"\$ac_sed_extra\" "$ac_file_inputs" | $AWK -f "$tmp/subs.awk" >$tmp/out \
-  || as_fn_error $? "could not create $ac_file" "$LINENO" 5
+eval sed \"\$ac_sed_extra\" "$ac_file_inputs" | $AWK -f "$ac_tmp/subs.awk" \
+  >$ac_tmp/out || as_fn_error $? "could not create $ac_file" "$LINENO" 5
 
 test -z "$ac_datarootdir_hack$ac_datarootdir_seen" &&
-  { ac_out=`sed -n '/\${datarootdir}/p' "$tmp/out"`; test -n "$ac_out"; } &&
-  { ac_out=`sed -n '/^[	 ]*datarootdir[	 ]*:*=/p' "$tmp/out"`; test -z "$ac_out"; } &&
+  { ac_out=`sed -n '/\${datarootdir}/p' "$ac_tmp/out"`; test -n "$ac_out"; } &&
+  { ac_out=`sed -n '/^[	 ]*datarootdir[	 ]*:*=/p' \
+      "$ac_tmp/out"`; test -z "$ac_out"; } &&
   { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $ac_file contains a reference to the variable \`datarootdir'
 which seems to be undefined.  Please make sure it is defined" >&5
 $as_echo "$as_me: WARNING: $ac_file contains a reference to the variable \`datarootdir'
 which seems to be undefined.  Please make sure it is defined" >&2;}
 
-  rm -f "$tmp/stdin"
+  rm -f "$ac_tmp/stdin"
   case $ac_file in
-  -) cat "$tmp/out" && rm -f "$tmp/out";;
-  *) rm -f "$ac_file" && mv "$tmp/out" "$ac_file";;
+  -) cat "$ac_tmp/out" && rm -f "$ac_tmp/out";;
+  *) rm -f "$ac_file" && mv "$ac_tmp/out" "$ac_file";;
   esac \
   || as_fn_error $? "could not create $ac_file" "$LINENO" 5
  ;;
@@ -11024,20 +11054,20 @@ which seems to be undefined.  Please make sure it is defined" >&2;}
   if test x"$ac_file" != x-; then
     {
       $as_echo "/* $configure_input  */" \
-      && eval '$AWK -f "$tmp/defines.awk"' "$ac_file_inputs"
-    } >"$tmp/config.h" \
+      && eval '$AWK -f "$ac_tmp/defines.awk"' "$ac_file_inputs"
+    } >"$ac_tmp/config.h" \
       || as_fn_error $? "could not create $ac_file" "$LINENO" 5
-    if diff "$ac_file" "$tmp/config.h" >/dev/null 2>&1; then
+    if diff "$ac_file" "$ac_tmp/config.h" >/dev/null 2>&1; then
       { $as_echo "$as_me:${as_lineno-$LINENO}: $ac_file is unchanged" >&5
 $as_echo "$as_me: $ac_file is unchanged" >&6;}
     else
       rm -f "$ac_file"
-      mv "$tmp/config.h" "$ac_file" \
+      mv "$ac_tmp/config.h" "$ac_file" \
 	|| as_fn_error $? "could not create $ac_file" "$LINENO" 5
     fi
   else
     $as_echo "/* $configure_input  */" \
-      && eval '$AWK -f "$tmp/defines.awk"' "$ac_file_inputs" \
+      && eval '$AWK -f "$ac_tmp/defines.awk"' "$ac_file_inputs" \
       || as_fn_error $? "could not create -" "$LINENO" 5
   fi
  ;;
diff --git a/configure.in b/configure.in
index 0dceda6a2..ebd53ddfa 100755
--- a/configure.in
+++ b/configure.in
@@ -1968,6 +1968,7 @@ mkdir -p  packages/PLStream/libtai
 mkdir -p  packages/plunit
 mkdir -p  packages/ProbLog
 mkdir -p  packages/ProbLog/simplecudd
+mkdir -p  packages/R
 mkdir -p  packages/RDF
 mkdir -p  packages/semweb
 mkdir -p  packages/sgml
@@ -2003,6 +2004,7 @@ AC_CONFIG_FILES([packages/meld/Makefile])
 AC_CONFIG_FILES([packages/PLStream/libtai/Makefile])
 AC_CONFIG_FILES([packages/plunit/Makefile])
 AC_CONFIG_FILES([packages/ProbLog/Makefile ])
+AC_CONFIG_FILES([packages/R/Makefile])
 AC_CONFIG_FILES([packages/RDF/Makefile])
 AC_CONFIG_FILES([packages/semweb/Makefile])
 AC_CONFIG_FILES([packages/sgml/Makefile])
diff --git a/library/dialect/swi/fli/blobs.c b/library/dialect/swi/fli/blobs.c
index 4dd807231..ef38a0041 100644
--- a/library/dialect/swi/fli/blobs.c
+++ b/library/dialect/swi/fli/blobs.c
@@ -56,7 +56,6 @@ lookupBlob(void *blob, size_t len, PL_blob_t *type)
 {
   BlobPropEntry *b;
   AtomEntry *ae;
-
   if (type->flags & PL_BLOB_UNIQUE) {
     /* just keep a linked chain for now */
     ae = SWI_Blobs;
diff --git a/packages/Dialect.defs.in b/packages/Dialect.defs.in
index 5cfbcc189..ac15b7e6d 100644
--- a/packages/Dialect.defs.in
+++ b/packages/Dialect.defs.in
@@ -47,6 +47,8 @@ CMFLAGS=@SHLIB_CFLAGS@
 CIFLAGS=
 CFLAGS=$(COFLAGS) $(CWFLAGS) $(CMFLAGS) $(CIFLAGS) $(PKGCFLAGS) @DEFS@
 
+RUNTEX = true
+
 LDSOFLAGS=@LDFLAGS@ @EXTRA_LIBS_FOR_SWIDLLS@
 LDFLAGS=$(PKGLDFLAGS)
 
diff --git a/packages/R b/packages/R
new file mode 160000
index 000000000..c6b45dc94
--- /dev/null
+++ b/packages/R
@@ -0,0 +1 @@
+Subproject commit c6b45dc94c0d398ed2bad7e3604aa05699e52521