:- module(clpbn_matrix_utils, [init_CPT/3, project_from_CPT/3, sum_out_from_CPT/5, project_from_CPT/6, reorder_CPT/5, get_CPT_sizes/2, normalise_CPT/2, multiply_CPTs/4, multiply_CPTs/6, divide_CPTs/3, expand_CPT/4, reset_CPT_that_disagrees/5, unit_CPT/2, sum_out_from_CPT/4, list_from_CPT/2, multiply_factors/3, normalise_possibly_deterministic_CPT/2, column_from_possibly_deterministic_CPT/3, multiply_possibly_deterministic_factors/3, random_CPT/2, uniform_CPT/2, uniform_CPT_as_list/2, normalise_CPT_on_lines/3 ]). :- use_module(library(matrix), [matrix_new/4, matrix_new_set/4, matrix_select/4, matrix_dims/2, matrix_size/2, matrix_shuffle/3, matrix_expand/3, matrix_op/4, matrix_dims/2, matrix_sum/2, matrix_sum_logs_out/3, matrix_sum_out/3, matrix_sum_logs_out_several/3, matrix_op_to_all/4, matrix_to_exps2/1, matrix_to_logs/1, matrix_set_all_that_disagree/5, matrix_to_list/2, matrix_agg_lines/3, matrix_agg_cols/3, matrix_op_to_lines/4, matrix_column/3 ]). init_CPT(List, Sizes, TAB) :- matrix_new(floats, Sizes, List, TAB), matrix_to_logs(TAB). init_possibly_deterministic_CPT(List, Sizes, TAB) :- matrix_new(floats, Sizes, List, TAB). % % select elements of matrix Table such that V=Pos % project_from_CPT(V, Pos, Table, Deps, NewTable, NDeps) :- vnth(Deps, 0, V, N, NDeps), matrix_select(Table, N, Pos, NewTable). % % sum-out varibale V from Table % sum_out_from_CPT(V, Table, Deps, NewTable, NDeps) :- vnth(Deps, 0, V, N, NDeps), matrix_sum_logs_out(Table, N, NewTable). project_from_CPT(V,tab(Table,Deps,_),tab(NewTable,NDeps,NSzs)) :- evidence(V,Pos), !, vnth(Deps, 0, V, N, NDeps), matrix_select(Table, N, Pos, NewTable), matrix_dims(NewTable, NSzs). project_from_CPT(V,tab(Table,Deps,_),tab(NewTable,NDeps,NSzs)) :- vnth(Deps, 0, V, N, NDeps), % matrix_to_exps2(Table), matrix_sum_logs_out(Table, N, NewTable), % matrix_to_logs(NewTable), matrix_dims(NewTable, NSzs). evidence(V, Pos) :- clpbn:get_atts(V, [evidence(Pos)]). vnth([V1|Deps], N, V, N, Deps) :- V == V1, !. vnth([V1|Deps], N0, V, N, [V1|NDeps]) :- N1 is N0+1, vnth(Deps, N1, V, N, NDeps). reorder_CPT(Vs0,T0,Vs,TF,Sizes) :- var(Vs), !, order_vec(Vs0,Vs,Map), ( Vs == Vs0 -> TF = T0 ; matrix_shuffle(T0,Map,TF) ), matrix_dims(TF, Sizes). reorder_CPT(Vs0,T0,Vs,TF,Sizes) :- mapping(Vs0,Vs,Map), ( Vs == Vs0 -> TF = T0 ; matrix_shuffle(T0,Map,TF) ), matrix_dims(TF, Sizes). order_vec(Vs0,Vs,Map) :- add_indices(Vs0,0,Is), keysort(Is,NIs), get_els(NIs, Vs, Map). add_indices([],_,[]). add_indices([V|Vs0],I0,[V-I0|Is]) :- I is I0+1, add_indices(Vs0,I,Is). get_els([], [], []). get_els([V-I|NIs], [V|Vs], [I|Map]) :- get_els(NIs, Vs, Map). mapping(Vs0,Vs,Map) :- add_indices(Vs0,0,I1s), add_indices( Vs,I2s), keysort(I1s,Ks), keysort(I2s,Ks), split_map(I2s, Map). add_indices([],[]). add_indices([V|Vs0],[V-_|I1s]) :- add_indices(Vs0,I1s). split_map([], []). split_map([_-M|Is], [M|Map]) :- split_map(Is, Map). divide_CPTs(Tab1, Tab2, OT) :- matrix_op(Tab1,Tab2,-,OT). multiply_CPTs(tab(Tab1, Deps1, Sz1), tab(Tab2, Deps2, Sz2), tab(OT, NDeps, NSz), NTab2) :- expand_tabs(Deps1, Sz1, Deps2, Sz2, Map1, Map2, NDeps), matrix_expand_compact(Tab1, Map1, NTab1), matrix_expand_compact(Tab2, Map2, NTab2), matrix_op(NTab1,NTab2,+,OT), matrix_dims(OT,NSz). multiply_CPTs(Tab1, Deps1, Tab2, Deps2, OT, NDeps) :- matrix_dims(Tab1, Sz1), matrix_dims(Tab2, Sz2), expand_tabs(Deps1, Sz1, Deps2, Sz2, Map1, Map2, NDeps), matrix_expand_compact(Tab1, Map1, NTab1), matrix_expand_compact(Tab2, Map2, NTab2), matrix_op(NTab1,NTab2,+,OT). expand_tabs([], [], [], [], [], [], []). expand_tabs([V1|Deps1], [S1|Sz1], [], [], [0|Map1], [S1|Map2], [V1|NDeps]) :- expand_tabs(Deps1, Sz1, [], [], Map1, Map2, NDeps). expand_tabs([], [], [V2|Deps2], [S2|Sz2], [S2|Map1], [0|Map2], [V2|NDeps]) :- expand_tabs([], [], Deps2, Sz2, Map1, Map2, NDeps). expand_tabs([V1|Deps1], [S1|Sz1], [V2|Deps2], [S2|Sz2], Map1, Map2, NDeps) :- compare(C,V1,V2), (C == = -> NDeps = [V1|MDeps], Map1 = [0|M1], Map2 = [0|M2], NDeps = [V1|MDeps], expand_tabs(Deps1, Sz1, Deps2, Sz2, M1, M2, MDeps) ; C == < -> NDeps = [V1|MDeps], Map1 = [0|M1], Map2 = [S1|M2], NDeps = [V1|MDeps], expand_tabs(Deps1, Sz1, [V2|Deps2], [S2|Sz2], M1, M2, MDeps) ; NDeps = [V2|MDeps], Map1 = [S2|M1], Map2 = [0|M2], NDeps = [V2|MDeps], expand_tabs([V1|Deps1], [S1|Sz1], Deps2, Sz2, M1, M2, MDeps) ). normalise_CPT(MAT,NMAT) :- matrix_to_exps2(MAT), matrix_sum(MAT, Sum), matrix_op_to_all(MAT, /, Sum, NMAT). list_from_CPT(MAT, List) :- matrix_to_list(MAT, List). expand_CPT(MAT0, Dims0, DimsNew, MAT) :- generate_map(DimsNew, Dims0, Map), matrix_expand(MAT0, Map, MAT). generate_map([], [], []). generate_map([V|DimsNew], [V0|Dims0], [0|Map]) :- V == V0, !, generate_map(DimsNew, Dims0, Map). generate_map([V|DimsNew], Dims0, [Sz|Map]) :- clpbn:get_atts(V, [dist(Id,_)]), clpbn_dist:get_dist_domain_size(Id, Sz), generate_map(DimsNew, Dims0, Map). unit_CPT(V,CPT) :- clpbn:get_atts(V, [dist(Id,_)]), clpbn_dist:get_dist_domain_size(Id, Sz), matrix_new_set(floats,[Sz],1.0,CPT). reset_CPT_that_disagrees(CPT, Vars, V, Pos, NCPT) :- vnth(Vars, 0, V, Dim, _), matrix_set_all_that_disagree(CPT, Dim, Pos, -inf, NCPT). sum_out_from_CPT(Vs,Table,Deps,tab(NewTable,Vs,Sz)) :- conversion_matrix(Vs, Deps, Conv), matrix_sum_logs_out_several(Table, Conv, NewTable), matrix_dims(NewTable, Sz). conversion_matrix([], [], []). conversion_matrix([], [_|Deps], [1|Conv]) :- conversion_matrix([], Deps, Conv). conversion_matrix([V|Vs], [V1|Deps], [0|Conv]) :- V==V1, !, conversion_matrix(Vs, Deps, Conv). conversion_matrix([V|Vs], [_|Deps], [1|Conv]) :- conversion_matrix([V|Vs], Deps, Conv). get_CPT_sizes(CPT, Sizes) :- matrix_dims(CPT, Sizes). matrix_expand_compact(M0,Zeros,M0) :- zero_map(Zeros), !. matrix_expand_compact(M0,Map,M) :- matrix_expand(M0, Map, M). zero_map([]). zero_map([0|Zeros]) :- zero_map(Zeros). col_from_CPT(CPT, Parents, Column) :- matrix_col(CPT, Parents, Column), matrix_to_logs(Column). column_from_possibly_deterministic_CPT(CPT, Parents, Column) :- matrix_column(CPT, Parents, Column). multiply_factors(F1, F2, F) :- matrix_op(F1,F2,+,F). multiply_possibly_deterministic_factors(F1, F2, F) :- matrix_op(F1,F2,*,F). normalise_possibly_deterministic_CPT(MAT,NMAT) :- matrix_agg_lines(MAT, +, Sum), matrix_op_to_lines(MAT, Sum, /, NMAT). random_CPT(Dims, M) :- mult_all(Dims,1,Size), generate_random_entries(Size, Randoms), matrix_new(floats, Dims, Randoms, M1), normalise_possibly_deterministic_CPT(M1, M). mult_all([],Size,Size). mult_all([D|Dims],Size0,Size) :- Size1 is Size0*D, mult_all(Dims,Size1,Size). generate_random_entries(0, []) :- !. generate_random_entries(Size, [R|Randoms]) :- R is random, Size1 is Size-1, generate_random_entries(Size1, Randoms). uniform_CPT_as_list(Dims, L) :- uniform_CPT(Dims, M), matrix_to_list(M, L). uniform_CPT(Dims, M) :- matrix_new_set(floats,Dims,1.0,M1), normalise_possibly_deterministic_CPT(M1, M). normalise_CPT_on_lines(MAT0, MAT2, L1) :- matrix_agg_cols(MAT0, +, MAT1), matrix_sum(MAT1, SUM), matrix_op_to_all(MAT1, /, SUM, MAT2), matrix:matrix_to_list(MAT2,L1).