1191 lines
53 KiB
C
1191 lines
53 KiB
C
/******************************************************************************\
|
|
* *
|
|
* SimpleCUDD library (www.cs.kuleuven.be/~theo/tools/simplecudd.html) *
|
|
* SimpleCUDD was developed at Katholieke Universiteit Leuven(www.kuleuven.be) *
|
|
* *
|
|
* Copyright Katholieke Universiteit Leuven 2008 *
|
|
* *
|
|
* Author: Theofrastos Mantadelis, Angelika Kimmig, Bernd Gutmann *
|
|
* File: ProblogBDD.c *
|
|
* *
|
|
********************************************************************************
|
|
* *
|
|
* Artistic License 2.0 *
|
|
* *
|
|
* Copyright (c) 2000-2006, The Perl Foundation. *
|
|
* *
|
|
* Everyone is permitted to copy and distribute verbatim copies of this license *
|
|
* document, but changing it is not allowed. *
|
|
* *
|
|
* Preamble *
|
|
* *
|
|
* This license establishes the terms under which a given free software Package *
|
|
* may be copied, modified, distributed, and/or redistributed. The intent is *
|
|
* that the Copyright Holder maintains some artistic control over the *
|
|
* development of that Package while still keeping the Package available as *
|
|
* open source and free software. *
|
|
* *
|
|
* You are always permitted to make arrangements wholly outside of this license *
|
|
* directly with the Copyright Holder of a given Package. If the terms of this *
|
|
* license do not permit the full use that you propose to make of the Package, *
|
|
* you should contact the Copyright Holder and seek a different licensing *
|
|
* arrangement. *
|
|
* Definitions *
|
|
* *
|
|
* "Copyright Holder" means the individual(s) or organization(s) named in the *
|
|
* copyright notice for the entire Package. *
|
|
* *
|
|
* "Contributor" means any party that has contributed code or other material to *
|
|
* the Package, in accordance with the Copyright Holder's procedures. *
|
|
* *
|
|
* "You" and "your" means any person who would like to copy, distribute, or *
|
|
* modify the Package. *
|
|
* *
|
|
* "Package" means the collection of files distributed by the Copyright Holder, *
|
|
* and derivatives of that collection and/or of those files. A given Package *
|
|
* may consist of either the Standard Version, or a Modified Version. *
|
|
* *
|
|
* "Distribute" means providing a copy of the Package or making it accessible *
|
|
* to anyone else, or in the case of a company or organization, to others *
|
|
* outside of your company or organization. *
|
|
* *
|
|
* "Distributor Fee" means any fee that you charge for Distributing this *
|
|
* Package or providing support for this Package to another party. It does not *
|
|
* mean licensing fees. *
|
|
* *
|
|
* "Standard Version" refers to the Package if it has not been modified, or has *
|
|
* been modified only in ways explicitly requested by the Copyright Holder. *
|
|
* *
|
|
* "Modified Version" means the Package, if it has been changed, and such *
|
|
* changes were not explicitly requested by the Copyright Holder. *
|
|
* *
|
|
* "Original License" means this Artistic License as Distributed with the *
|
|
* Standard Version of the Package, in its current version or as it may be *
|
|
* modified by The Perl Foundation in the future. *
|
|
* *
|
|
* "Source" form means the source code, documentation source, and configuration *
|
|
* files for the Package. *
|
|
* *
|
|
* "Compiled" form means the compiled bytecode, object code, binary, or any *
|
|
* other form resulting from mechanical transformation or translation of the *
|
|
* Source form. *
|
|
* Permission for Use and Modification Without Distribution *
|
|
* *
|
|
* (1) You are permitted to use the Standard Version and create and use *
|
|
* Modified Versions for any purpose without restriction, provided that you do *
|
|
* not Distribute the Modified Version. *
|
|
* Permissions for Redistribution of the Standard Version *
|
|
* *
|
|
* (2) You may Distribute verbatim copies of the Source form of the Standard *
|
|
* Version of this Package in any medium without restriction, either gratis or *
|
|
* for a Distributor Fee, provided that you duplicate all of the original *
|
|
* copyright notices and associated disclaimers. At your discretion, such *
|
|
* verbatim copies may or may not include a Compiled form of the Package. *
|
|
* *
|
|
* (3) You may apply any bug fixes, portability changes, and other *
|
|
* modifications made available from the Copyright Holder. The resulting *
|
|
* Package will still be considered the Standard Version, and as such will be *
|
|
* subject to the Original License. *
|
|
* Distribution of Modified Versions of the Package as Source *
|
|
* *
|
|
* (4) You may Distribute your Modified Version as Source (either gratis or for *
|
|
* a Distributor Fee, and with or without a Compiled form of the Modified *
|
|
* Version) provided that you clearly document how it differs from the Standard *
|
|
* Version, including, but not limited to, documenting any non-standard *
|
|
* features, executables, or modules, and provided that you do at least ONE of *
|
|
* the following: *
|
|
* *
|
|
* (a) make the Modified Version available to the Copyright Holder of the *
|
|
* Standard Version, under the Original License, so that the Copyright Holder *
|
|
* may include your modifications in the Standard Version. *
|
|
* (b) ensure that installation of your Modified Version does not prevent the *
|
|
* user installing or running the Standard Version. In addition, the Modified *
|
|
* Version must bear a name that is different from the name of the Standard *
|
|
* Version. *
|
|
* (c) allow anyone who receives a copy of the Modified Version to make the *
|
|
* Source form of the Modified Version available to others under *
|
|
* (i) the Original License or *
|
|
* (ii) a license that permits the licensee to freely copy, modify and *
|
|
* redistribute the Modified Version using the same licensing terms that apply *
|
|
* to the copy that the licensee received, and requires that the Source form of *
|
|
* the Modified Version, and of any works derived from it, be made freely *
|
|
* available in that license fees are prohibited but Distributor Fees are *
|
|
* allowed. *
|
|
* Distribution of Compiled Forms of the Standard Version or Modified Versions *
|
|
* without the Source *
|
|
* *
|
|
* (5) You may Distribute Compiled forms of the Standard Version without the *
|
|
* Source, provided that you include complete instructions on how to get the *
|
|
* Source of the Standard Version. Such instructions must be valid at the time *
|
|
* of your distribution. If these instructions, at any time while you are *
|
|
* carrying out such distribution, become invalid, you must provide new *
|
|
* instructions on demand or cease further distribution. If you provide valid *
|
|
* instructions or cease distribution within thirty days after you become aware *
|
|
* that the instructions are invalid, then you do not forfeit any of your *
|
|
* rights under this license. *
|
|
* *
|
|
* (6) You may Distribute a Modified Version in Compiled form without the *
|
|
* Source, provided that you comply with Section 4 with respect to the Source *
|
|
* of the Modified Version. *
|
|
* Aggregating or Linking the Package *
|
|
* *
|
|
* (7) You may aggregate the Package (either the Standard Version or Modified *
|
|
* Version) with other packages and Distribute the resulting aggregation *
|
|
* provided that you do not charge a licensing fee for the Package. Distributor *
|
|
* Fees are permitted, and licensing fees for other components in the *
|
|
* aggregation are permitted. The terms of this license apply to the use and *
|
|
* Distribution of the Standard or Modified Versions as included in the *
|
|
* aggregation. *
|
|
* *
|
|
* (8) You are permitted to link Modified and Standard Versions with other *
|
|
* works, to embed the Package in a larger work of your own, or to build *
|
|
* stand-alone binary or bytecode versions of applications that include the *
|
|
* Package, and Distribute the result without restriction, provided the result *
|
|
* does not expose a direct interface to the Package. *
|
|
* Items That are Not Considered Part of a Modified Version *
|
|
* *
|
|
* (9) Works (including, but not limited to, modules and scripts) that merely *
|
|
* extend or make use of the Package, do not, by themselves, cause the Package *
|
|
* to be a Modified Version. In addition, such works are not considered parts *
|
|
* of the Package itself, and are not subject to the terms of this license. *
|
|
* General Provisions *
|
|
* *
|
|
* (10) Any use, modification, and distribution of the Standard or Modified *
|
|
* Versions is governed by this Artistic License. By using, modifying or *
|
|
* distributing the Package, you accept this license. Do not use, modify, or *
|
|
* distribute the Package, if you do not accept this license. *
|
|
* *
|
|
* (11) If your Modified Version has been derived from a Modified Version made *
|
|
* by someone other than you, you are nevertheless required to ensure that your *
|
|
* Modified Version complies with the requirements of this license. *
|
|
* *
|
|
* (12) This license does not grant you the right to use any trademark, service *
|
|
* mark, tradename, or logo of the Copyright Holder. *
|
|
* *
|
|
* (13) This license includes the non-exclusive, worldwide, free-of-charge *
|
|
* patent license to make, have made, use, offer to sell, sell, import and *
|
|
* otherwise transfer the Package with respect to any patent claims licensable *
|
|
* by the Copyright Holder that are necessarily infringed by the Package. If *
|
|
* you institute patent litigation (including a cross-claim or counterclaim) *
|
|
* against any party alleging that the Package constitutes direct or *
|
|
* contributory patent infringement, then this Artistic License to you shall *
|
|
* terminate on the date that such litigation is filed. *
|
|
* *
|
|
* (14) Disclaimer of Warranty: THE PACKAGE IS PROVIDED BY THE COPYRIGHT HOLDER *
|
|
* AND CONTRIBUTORS "AS IS' AND WITHOUT ANY EXPRESS OR IMPLIED WARRANTIES. THE *
|
|
* IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, OR *
|
|
* NON-INFRINGEMENT ARE DISCLAIMED TO THE EXTENT PERMITTED BY YOUR LOCAL LAW. *
|
|
* UNLESS REQUIRED BY LAW, NO COPYRIGHT HOLDER OR CONTRIBUTOR WILL BE LIABLE *
|
|
* FOR ANY DIRECT, INDIRECT, INCIDENTAL, OR CONSEQUENTIAL DAMAGES ARISING IN *
|
|
* ANY WAY OUT OF THE USE OF THE PACKAGE, EVEN IF ADVISED OF THE POSSIBILITY OF *
|
|
* SUCH DAMAGE. *
|
|
* *
|
|
* The End *
|
|
* *
|
|
\******************************************************************************/
|
|
|
|
#include "simplecudd.h"
|
|
#include "problogmath.h"
|
|
#include "pqueue.h"
|
|
#include "iqueue.h"
|
|
#include <signal.h>
|
|
#include <stdarg.h>
|
|
#define VERSION "2.0.0"
|
|
|
|
int all_loaded_for_deterministic_variables(namedvars varmap, int disp);
|
|
|
|
typedef struct _parameters {
|
|
int loadfile;
|
|
int savedfile;
|
|
int exportfile;
|
|
int inputfile;
|
|
int debug;
|
|
int errorcnt;
|
|
int *error;
|
|
int method;
|
|
int queryid;
|
|
int timeout;
|
|
double sigmoid_slope;
|
|
int online;
|
|
int maxbufsize;
|
|
char *ppid;
|
|
int orderfile;
|
|
} parameters;
|
|
|
|
typedef struct _gradientpair {
|
|
double probability;
|
|
double gradient;
|
|
} gradientpair;
|
|
|
|
typedef struct _extmanager {
|
|
DdManager *manager;
|
|
DdNode *t, *f;
|
|
hisqueue *his;
|
|
namedvars varmap;
|
|
} extmanager;
|
|
|
|
int argtype(const char *arg);
|
|
void printhelp(int argc, char **arg);
|
|
parameters loadparam(int argc, char **arg);
|
|
parameters params;
|
|
|
|
void handler(int num);
|
|
void pidhandler(int num);
|
|
void termhandler(int num);
|
|
|
|
void myexpand(extmanager MyManager, DdNode *Current);
|
|
double CalcProbability(extmanager MyManager, DdNode *Current);
|
|
double CalcProbabilitySigmoid(extmanager MyManager, DdNode *Current);
|
|
gradientpair CalcGradient(extmanager MyManager, DdNode *Current, int TargetVar, char *TargetPattern, int type);
|
|
double CalcExpectedCountsUp(extmanager * MyManager, DdNode *Current, char *query_id) ;
|
|
double CalcExpectedCountsDown(extmanager * MyManager, DdNode *Current, char *query_id);
|
|
double CalcExpectedCounts(extmanager * MyManager, DdNode *Current, char *query_id, int calcdown_needed);
|
|
int patterncalculated(char *pattern, extmanager MyManager, int loc);
|
|
char * extractpattern(const char *thestr);
|
|
|
|
int main(int argc, char **arg) {
|
|
extmanager MyManager;
|
|
DdNode *bdd = NULL, **forest = NULL, *bakbdd= NULL;
|
|
bddfileheader fileheader;
|
|
int i, ivarcnt, code, curbdd;
|
|
gradientpair tvalue;
|
|
double probability = -1.0;
|
|
char *varpattern;
|
|
varpattern = NULL;
|
|
code = -1;
|
|
params = loadparam(argc, arg);
|
|
|
|
if (params.errorcnt > 0) {
|
|
printhelp(argc, arg);
|
|
for (i = 0; i < params.errorcnt; i++) {
|
|
fprintf(stderr, "Error: not known or error at parameter %s.\n", arg[params.error[i]]);
|
|
}
|
|
return -1;
|
|
}
|
|
|
|
if (params.online == 0 && params.loadfile == -1) {
|
|
printhelp(argc, arg);
|
|
fprintf(stderr, "Error: you must specify a loading file.\n");
|
|
return -1;
|
|
}
|
|
|
|
if (params.method != 0 && arg[params.method][0] != 'g' && arg[params.method][0] != 'p' && arg[params.method][0] != 'o' && arg[params.method][0] != 'l' && arg[params.method][0] != 'e' && arg[params.method][0] != 'd') {
|
|
printhelp(argc, arg);
|
|
fprintf(stderr, "Error: you must choose a calculation method beetween [p]robability, [g]radient, [l]ine search, [o]nline, [e]xpected counts, probability with [d]eterministic nodes.\n");
|
|
return -1;
|
|
}
|
|
|
|
if (params.method != 0 && (arg[params.method][0] == 'g' || arg[params.method][0] == 'p' || arg[params.method][0] == 'l'|| arg[params.method][0] == 'e'|| arg[params.method][0] == 'd') && params.inputfile == -1) {
|
|
printhelp(argc, arg);
|
|
fprintf(stderr, "Error: an input file is necessary for probability, gradient, line search calculation or expected counts methods.\n");
|
|
return -1;
|
|
}
|
|
|
|
if (params.debug) DEBUGON;
|
|
RAPIDLOADON;
|
|
SETMAXBUFSIZE(params.maxbufsize);
|
|
|
|
signal(SIGINT, termhandler);
|
|
#ifndef __MINGW32__
|
|
if (params.ppid != NULL) {
|
|
signal(SIGALRM, pidhandler);
|
|
alarm(5);
|
|
} else {
|
|
signal(SIGALRM, handler);
|
|
alarm(params.timeout);
|
|
}
|
|
#endif
|
|
|
|
if (params.online) {
|
|
MyManager.manager = simpleBDDinit(0);
|
|
MyManager.t = HIGH(MyManager.manager);
|
|
MyManager.f = LOW(MyManager.manager);
|
|
MyManager.varmap = InitNamedVars(1, 0);
|
|
bdd = OnlineGenerateBDD(MyManager.manager, &MyManager.varmap);
|
|
ivarcnt = GetVarCount(MyManager.manager);
|
|
} else {
|
|
//fprintf(stderr,"reading file \n");
|
|
fileheader = ReadFileHeader(arg[params.loadfile]);
|
|
switch(fileheader.filetype) {
|
|
case BDDFILE_SCRIPT:
|
|
// fprintf(stderr," ..... %i \n",fileheader.varcnt);
|
|
MyManager.manager = simpleBDDinit(fileheader.varcnt);
|
|
MyManager.t = HIGH(MyManager.manager);
|
|
MyManager.f = LOW(MyManager.manager);
|
|
MyManager.varmap = InitNamedVars(fileheader.varcnt, fileheader.varstart);
|
|
if (fileheader.version > 1) {
|
|
forest = FileGenerateBDDForest(MyManager.manager, MyManager.varmap, fileheader);
|
|
bdd = forest[0];
|
|
bakbdd = bdd;
|
|
} else {
|
|
forest = NULL;
|
|
bdd = FileGenerateBDD(MyManager.manager, MyManager.varmap, fileheader);
|
|
bakbdd = bdd;
|
|
}
|
|
ivarcnt = fileheader.varcnt;
|
|
break;
|
|
case BDDFILE_NODEDUMP:
|
|
MyManager.manager = simpleBDDinit(fileheader.varcnt);
|
|
MyManager.t = HIGH(MyManager.manager);
|
|
MyManager.f = LOW(MyManager.manager);
|
|
MyManager.varmap = InitNamedVars(fileheader.varcnt, fileheader.varstart);
|
|
bdd = LoadNodeDump(MyManager.manager, MyManager.varmap, fileheader.inputfile);
|
|
ivarcnt = fileheader.varcnt;
|
|
break;
|
|
default:
|
|
fprintf(stderr, "Error: not a valid file format to load.\n");
|
|
return -1;
|
|
break;
|
|
}
|
|
// fprintf(stderr,"bdd built\n");
|
|
}
|
|
|
|
|
|
alarm(0);
|
|
|
|
// problem specifics
|
|
|
|
if (bdd != NULL) {
|
|
ivarcnt = RepairVarcnt(&MyManager.varmap);
|
|
code = 0;
|
|
if (params.inputfile != -1) {
|
|
if (LoadVariableData(MyManager.varmap, arg[params.inputfile]) == -1) return -1;
|
|
// if (!all_loaded(MyManager.varmap, 1)) return -1;
|
|
all_loaded_for_deterministic_variables(MyManager.varmap, 1);
|
|
}
|
|
// impose a predifined order good for debugging
|
|
// can be used with a partial number of variables to impose ordering at beggining of BDD
|
|
if (params.orderfile != -1) {
|
|
ImposeOrder(MyManager.manager, MyManager.varmap, GetVariableOrder(arg[params.orderfile], MyManager.varmap.varcnt));
|
|
}
|
|
curbdd = 0;
|
|
do {
|
|
MyManager.his = InitHistory(ivarcnt);
|
|
if (params.method != 0) {
|
|
switch(arg[params.method][0]) {
|
|
case 'g':
|
|
for (i = 0; i < MyManager.varmap.varcnt; i++) {
|
|
if (MyManager.varmap.vars[i] != NULL) {
|
|
|
|
// check whether this is a continues fact
|
|
if (MyManager.varmap.dynvalue[i] == NULL) { // nope, regular fact
|
|
varpattern = extractpattern(MyManager.varmap.vars[i]);
|
|
if ((varpattern == NULL) || (!patterncalculated(varpattern, MyManager, i))) {
|
|
tvalue = CalcGradient(MyManager, bdd, i + MyManager.varmap.varstart, varpattern, 0);
|
|
probability = tvalue.probability;
|
|
if (varpattern == NULL) {
|
|
printf("query_gradient(%s,%s,p,%e).\n", arg[params.queryid], MyManager.varmap.vars[i], tvalue.gradient);
|
|
} else {
|
|
varpattern[strlen(varpattern) - 2] = '\0';
|
|
printf("query_gradient(%s,%s,p,%e).\n", arg[params.queryid], varpattern, tvalue.gradient);
|
|
}
|
|
ReInitHistory(MyManager.his, MyManager.varmap.varcnt);
|
|
if (varpattern != NULL) free(varpattern);
|
|
}
|
|
} else { // it is! let's do the Hybrid Problog Magic
|
|
// first for mu
|
|
varpattern = extractpattern(MyManager.varmap.vars[i]);
|
|
if ((varpattern == NULL) || (!patterncalculated(varpattern, MyManager, i))) {
|
|
tvalue = CalcGradient(MyManager, bdd, i + MyManager.varmap.varstart, varpattern, 1);
|
|
probability = tvalue.probability;
|
|
if (varpattern == NULL) {
|
|
printf("query_gradient(%s,%s,mu,%e).\n", arg[params.queryid], MyManager.varmap.vars[i], tvalue.gradient);
|
|
} else {
|
|
varpattern[strlen(varpattern) - 2] = '\0';
|
|
printf("query_gradient(%s,%s,mu,%e).\n", arg[params.queryid], varpattern, tvalue.gradient);
|
|
}
|
|
}
|
|
ReInitHistory(MyManager.his, MyManager.varmap.varcnt);
|
|
if (varpattern != NULL) free(varpattern);
|
|
|
|
// then for sigma
|
|
varpattern = extractpattern(MyManager.varmap.vars[i]);
|
|
if ((varpattern == NULL) || (!patterncalculated(varpattern, MyManager, i))) {
|
|
tvalue = CalcGradient(MyManager, bdd, i + MyManager.varmap.varstart, varpattern, 2);
|
|
probability = tvalue.probability;
|
|
if (varpattern == NULL) {
|
|
printf("query_gradient(%s,%s,sigma,%e).\n", arg[params.queryid], MyManager.varmap.vars[i], tvalue.gradient);
|
|
} else {
|
|
varpattern[strlen(varpattern) - 2] = '\0';
|
|
printf("query_gradient(%s,%s,sigma,%e).\n", arg[params.queryid], varpattern, tvalue.gradient);
|
|
}
|
|
}
|
|
ReInitHistory(MyManager.his, MyManager.varmap.varcnt);
|
|
if (varpattern != NULL) free(varpattern);
|
|
}
|
|
|
|
} else {
|
|
fprintf(stderr, "Error: no variable name given for parameter.\n");
|
|
}
|
|
}
|
|
if (probability < 0.0) {
|
|
// no nodes, so we have to calculate probability ourself
|
|
tvalue = CalcGradient(MyManager, bdd, 0 + MyManager.varmap.varstart, NULL, 0);
|
|
probability = tvalue.probability;
|
|
}
|
|
printf("query_probability(%s,%e).\n", arg[params.queryid], probability);
|
|
break;
|
|
case 'l':
|
|
tvalue = CalcGradient(MyManager, bdd, 0 + MyManager.varmap.varstart, NULL, 0);
|
|
probability = tvalue.probability;
|
|
printf("query_probability(%s,%e).\n", arg[params.queryid], probability);
|
|
break;
|
|
case 'e':
|
|
//fprintf(stderr,"start calc exp count\n");
|
|
printf("query_probability(%s,%30.30e).\n", arg[params.queryid],CalcExpectedCounts(&MyManager, bdd,arg[params.queryid],1));
|
|
break;
|
|
case 'd':
|
|
//fprintf(stderr,"start calc exp count\n");
|
|
printf("query_probability(%s,%30.30e).\n", arg[params.queryid],CalcExpectedCounts(&MyManager, bdd,arg[params.queryid],0));
|
|
break;
|
|
case 'p':
|
|
printf("query_probability(%s,%e).\n", arg[params.queryid], CalcProbability(MyManager, bdd));
|
|
break;
|
|
case 'o':
|
|
onlinetraverse(MyManager.manager, MyManager.varmap, MyManager.his, bdd);
|
|
break;
|
|
default:
|
|
myexpand(MyManager, bdd);
|
|
break;
|
|
}
|
|
} else {
|
|
myexpand(MyManager, bdd);
|
|
}
|
|
if (forest != NULL) {
|
|
curbdd++;
|
|
bdd = forest[curbdd];
|
|
} else {
|
|
bdd = NULL;
|
|
}
|
|
ReInitHistory(MyManager.his, MyManager.varmap.varcnt);
|
|
} while(bdd != NULL);
|
|
bdd = bakbdd;
|
|
if (params.savedfile > -1) SaveNodeDump(MyManager.manager, MyManager.varmap, bdd, arg[params.savedfile]);
|
|
if (params.exportfile > -1) simpleNamedBDDtoDot(MyManager.manager, MyManager.varmap, bdd, arg[params.exportfile]);
|
|
free(MyManager.his);
|
|
}
|
|
if (MyManager.manager != NULL) {
|
|
KillBDD(MyManager.manager);
|
|
free(MyManager.varmap.dvalue);
|
|
free(MyManager.varmap.ivalue);
|
|
if (MyManager.varmap.dynvalue != NULL) {
|
|
for(i = 0; i < MyManager.varmap.varcnt; i++)
|
|
if (MyManager.varmap.dynvalue[i] != NULL) {
|
|
free(MyManager.varmap.dynvalue[i]);
|
|
}
|
|
free(MyManager.varmap.dynvalue);
|
|
}
|
|
for (i = 0; i < MyManager.varmap.varcnt; i++)
|
|
free((const char *)MyManager.varmap.vars[i]);
|
|
free(MyManager.varmap.vars);
|
|
}
|
|
if (params.error != NULL) free(params.error);
|
|
|
|
return code;
|
|
|
|
}
|
|
|
|
/* Shell Parameters handling */
|
|
|
|
int argtype(const char *arg) {
|
|
if (strcmp(arg, "-l") == 0 || strcmp(arg, "--load") == 0) return 0;
|
|
if (strcmp(arg, "-e") == 0 || strcmp(arg, "--export") == 0) return 2;
|
|
if (strcmp(arg, "-m") == 0 || strcmp(arg, "--method") == 0) return 3;
|
|
if (strcmp(arg, "-i") == 0 || strcmp(arg, "--input") == 0) return 4;
|
|
if (strcmp(arg, "-h") == 0 || strcmp(arg, "--help") == 0) return 5;
|
|
if (strcmp(arg, "-d") == 0 || strcmp(arg, "--debug") == 0) return 6;
|
|
if (strcmp(arg, "-id") == 0 || strcmp(arg, "--queryid") == 0) return 7;
|
|
if (strcmp(arg, "-t") == 0 || strcmp(arg, "--timeout") == 0) return 8;
|
|
if (strcmp(arg, "-sd") == 0 || strcmp(arg, "--savedump") == 0) return 9;
|
|
if (strcmp(arg, "-sl") == 0 || strcmp(arg, "--slope") == 0) return 10;
|
|
if (strcmp(arg, "-o") == 0 || strcmp(arg, "--online") == 0) return 11;
|
|
if (strcmp(arg, "-bs") == 0 || strcmp(arg, "--bufsize") == 0) return 12;
|
|
if (strcmp(arg, "-pid") == 0 || strcmp(arg, "--pid") == 0) return 13;
|
|
if (strcmp(arg, "-ord") == 0 || strcmp(arg, "--order") == 0) return 14;
|
|
|
|
return -1;
|
|
}
|
|
|
|
void printhelp(int argc, char **arg) {
|
|
fprintf(stderr, "\n\nProbLogBDD Tool Version: %s\n\n", VERSION);
|
|
fprintf(stderr, "SimpleCUDD library (www.cs.kuleuven.be/~theo/tools/simplecudd.html)\n");
|
|
fprintf(stderr, "SimpleCUDD was developed at Katholieke Universiteit Leuven(www.kuleuven.be)\n");
|
|
fprintf(stderr, "Copyright Katholieke Universiteit Leuven 2008\n");
|
|
fprintf(stderr, "Authors: Theofrastos Mantadelis, Angelika Kimmig, Bernd Gutmann\n");
|
|
fprintf(stderr, "This package falls under the: Artistic License 2.0\n");
|
|
fprintf(stderr, "\nUsage: %s -l [filename] -i [filename] -o (-s(d) [filename] -e [filename] -m [method] -id [queryid] -sl [double]) (-t [seconds] -d -h)\n", arg[0]);
|
|
fprintf(stderr, "Generates and traverses a BDD\nMandatory parameters:\n");
|
|
fprintf(stderr, "\t-l [filename]\t->\tfilename to load supports two formats:\n\t\t\t\t\t\t1. script with generation instructions\n\t\t\t\t\t\t2. node dump saved file\n");
|
|
fprintf(stderr, "\t-i [filename]\t->\tfilename to input problem specifics (mandatory with file formats 1, 2)\n");
|
|
fprintf(stderr, "\t-o\t\t->\tgenerates the BDD in online mode instead from a file can be used instead of -l\n");
|
|
fprintf(stderr, "Optional parameters:\n");
|
|
fprintf(stderr, "\t-sd [filename]\t->\tfilename to save generated BDD in node dump format (fast loading, traverse valid only)\n");
|
|
fprintf(stderr, "\t-e [filename]\t->\tfilename to export generated BDD in dot format\n");
|
|
fprintf(stderr, "\t-m [method]\t->\tthe calculation method to be used: none(default), [p]robability, [g]radient, [l]ine search, [o]nline, [e]xpexted counts, prob. with [d]eterministic nodes\n");
|
|
fprintf(stderr, "\t-id [queryid]\t->\tthe queries identity name (used by gradient) default: %s\n", arg[0]);
|
|
fprintf(stderr, "\t-sl [double]\t->\tthe sigmoid slope (used by gradient) default: 1.0\n");
|
|
fprintf(stderr, "Extra parameters:\n");
|
|
fprintf(stderr, "\t-t [seconds]\t->\tthe seconds (int) for BDD generation timeout default 0 = no timeout\n");
|
|
fprintf(stderr, "\t-pid [pid]\t->\ta process id (int) to check for termination default 0 = no process to check\n");
|
|
fprintf(stderr, "\t-bs [bytes]\t->\tthe bytes (int) to use as a maximum buffer size to read files default 0 = no max\n");
|
|
fprintf(stderr, "\t-ord [filename]\t->\tUse the [filename] to define a specific BDD variable order\n");
|
|
fprintf(stderr, "\t-d\t\t->\tRun in debug mode (gives extra messages in stderr)\n");
|
|
fprintf(stderr, "\t-h\t\t->\tHelp (displays this message)\n");
|
|
fprintf(stderr, "Extra notes:\nSupports a forest of BDDs in one shared BDD.\nSelected computational methods will be applied to each BDD seperately.\nFile operations will be applied only to the first BDD.\n");
|
|
fprintf(stderr, "\nExample: %s -l testbdd -i input.txt -m g -id testbdd\n", arg[0]);
|
|
}
|
|
|
|
parameters loadparam(int argc, char **arg) {
|
|
int i;
|
|
parameters params;
|
|
params.loadfile = -1;
|
|
params.savedfile = -1;
|
|
params.exportfile = -1;
|
|
params.method = 0;
|
|
params.inputfile = -1;
|
|
params.debug = 0;
|
|
params.errorcnt = 0;
|
|
params.queryid = 0;
|
|
params.timeout = 0;
|
|
params.sigmoid_slope = 1.0;
|
|
params.online = 0;
|
|
params.maxbufsize = 0;
|
|
params.ppid = NULL;
|
|
params.orderfile = -1;
|
|
params.error = (int *) malloc(argc * sizeof(int));
|
|
for (i = 1; i < argc; i++) {
|
|
switch(argtype(arg[i])) {
|
|
case 0:
|
|
if (argc > i + 1) {
|
|
i++;
|
|
params.loadfile = i;
|
|
} else {
|
|
params.error[params.errorcnt] = i;
|
|
params.errorcnt++;
|
|
}
|
|
break;
|
|
case 2:
|
|
if (argc > i + 1) {
|
|
i++;
|
|
params.exportfile = i;
|
|
} else {
|
|
params.error[params.errorcnt] = i;
|
|
params.errorcnt++;
|
|
}
|
|
break;
|
|
case 3:
|
|
if (argc > i + 1) {
|
|
i++;
|
|
params.method = i;
|
|
} else {
|
|
params.error[params.errorcnt] = i;
|
|
params.errorcnt++;
|
|
}
|
|
break;
|
|
case 4:
|
|
if (argc > i + 1) {
|
|
i++;
|
|
params.inputfile = i;
|
|
} else {
|
|
params.error[params.errorcnt] = i;
|
|
params.errorcnt++;
|
|
}
|
|
break;
|
|
case 5:
|
|
printhelp(argc, arg);
|
|
break;
|
|
case 6:
|
|
params.debug = 1;
|
|
break;
|
|
case 7:
|
|
if (argc > i + 1) {
|
|
i++;
|
|
params.queryid = i;
|
|
} else {
|
|
params.error[params.errorcnt] = i;
|
|
params.errorcnt++;
|
|
}
|
|
break;
|
|
case 8:
|
|
if ((argc > i + 1) && (IsPosNumber(arg[i + 1]))) {
|
|
i++;
|
|
params.timeout = atoi(arg[i]);
|
|
} else {
|
|
params.error[params.errorcnt] = i;
|
|
params.errorcnt++;
|
|
}
|
|
break;
|
|
case 9:
|
|
if (argc > i + 1) {
|
|
i++;
|
|
params.savedfile = i;
|
|
} else {
|
|
params.error[params.errorcnt] = i;
|
|
params.errorcnt++;
|
|
}
|
|
break;
|
|
case 10:
|
|
if ((argc > i + 1) && (IsRealNumber(arg[i + 1]))) {
|
|
i++;
|
|
params.sigmoid_slope = atof(arg[i]);
|
|
} else {
|
|
params.error[params.errorcnt] = i;
|
|
params.errorcnt++;
|
|
}
|
|
break;
|
|
case 11:
|
|
params.online = 1;
|
|
break;
|
|
case 12:
|
|
if ((argc > i + 1) && (IsPosNumber(arg[i + 1]))) {
|
|
i++;
|
|
params.maxbufsize = atoi(arg[i]);
|
|
} else {
|
|
params.error[params.errorcnt] = i;
|
|
params.errorcnt++;
|
|
}
|
|
break;
|
|
case 13:
|
|
if ((argc > i + 1) && (IsPosNumber(arg[i + 1]))) {
|
|
i++;
|
|
params.ppid = (char *) malloc(sizeof(char) * (strlen(arg[i]) + 1));
|
|
strcpy(params.ppid, arg[i]);
|
|
} else {
|
|
params.error[params.errorcnt] = i;
|
|
params.errorcnt++;
|
|
}
|
|
break;
|
|
case 14:
|
|
if (argc > i + 1) {
|
|
i++;
|
|
params.orderfile = i;
|
|
} else {
|
|
params.error[params.errorcnt] = i;
|
|
params.errorcnt++;
|
|
}
|
|
break;
|
|
default:
|
|
params.error[params.errorcnt] = i;
|
|
params.errorcnt++;
|
|
break;
|
|
}
|
|
}
|
|
return params;
|
|
}
|
|
|
|
/* Error Handlers */
|
|
|
|
void handler(int num) {
|
|
fprintf(stderr, "Error: Timeout %i exceeded.\n", params.timeout);
|
|
exit(-1);
|
|
}
|
|
|
|
void pidhandler(int num) {
|
|
char *s;
|
|
if (params.timeout > 0) {
|
|
params.timeout -= 5;
|
|
if (params.timeout <= 0) {
|
|
fprintf(stderr, "Error: Timeout exceeded.\n");
|
|
exit(-1);
|
|
}
|
|
}
|
|
s = (char *) malloc(sizeof(char) * (19 + strlen(params.ppid)));
|
|
strcpy(s, "ps "); strcat(s, params.ppid); strcat(s, " >/dev/null");
|
|
if (system(s) != 0) exit(4);
|
|
#ifndef __MINGW32__
|
|
signal(SIGALRM, pidhandler);
|
|
#endif
|
|
alarm(5);
|
|
free(s);
|
|
}
|
|
|
|
void termhandler(int num) {
|
|
exit(3);
|
|
}
|
|
|
|
/* Debugging traverse function */
|
|
|
|
void myexpand(extmanager MyManager, DdNode *Current) {
|
|
DdNode *h, *l;
|
|
hisnode *Found;
|
|
char *curnode;
|
|
curnode = GetNodeVarNameDisp(MyManager.manager, MyManager.varmap, Current);
|
|
printf("%s\n", curnode);
|
|
if ((Current != MyManager.t) && (Current != MyManager.f) &&
|
|
((Found = GetNode(MyManager.his, MyManager.varmap.varstart, Current)) == NULL)) {
|
|
l = LowNodeOf(MyManager.manager, Current);
|
|
h = HighNodeOf(MyManager.manager, Current);
|
|
printf("l(%s)->", curnode);
|
|
myexpand(MyManager, l);
|
|
printf("h(%s)->", curnode);
|
|
myexpand(MyManager, h);
|
|
AddNode(MyManager.his, MyManager.varmap.varstart, Current, 0.0, 0, NULL);
|
|
}
|
|
}
|
|
|
|
/* Angelika's Algorithm */
|
|
|
|
double CalcProbability(extmanager MyManager, DdNode *Current) {
|
|
DdNode *h, *l;
|
|
hisnode *Found = NULL;
|
|
char *curnode; //, *dynvalue;
|
|
double lvalue, hvalue, tvalue;
|
|
// density_integral dynvalue_parsed;
|
|
|
|
if (params.debug) {
|
|
curnode = GetNodeVarNameDisp(MyManager.manager, MyManager.varmap, Current);
|
|
fprintf(stderr, "%s\n", curnode);
|
|
} else {
|
|
// gcc stupidly complains.
|
|
curnode = NULL;
|
|
}
|
|
if (Current == MyManager.t) return 1.0;
|
|
if (Current == MyManager.f) return 0.0;
|
|
|
|
if ((Found = GetNode(MyManager.his, MyManager.varmap.varstart, Current)) != NULL) return Found->dvalue;
|
|
l = LowNodeOf(MyManager.manager, Current);
|
|
h = HighNodeOf(MyManager.manager, Current);
|
|
if (params.debug) fprintf(stderr, "l(%s)->", curnode);
|
|
lvalue = CalcProbability(MyManager, l);
|
|
if (params.debug) fprintf(stderr, "h(%s)->", curnode);
|
|
hvalue = CalcProbability(MyManager, h);
|
|
|
|
|
|
tvalue = MyManager.varmap.dvalue[GetIndex(Current) - MyManager.varmap.varstart];
|
|
|
|
tvalue = tvalue * hvalue + lvalue * (1.0 - tvalue);
|
|
AddNode(MyManager.his, MyManager.varmap.varstart, Current, tvalue, 0, NULL);
|
|
return tvalue;
|
|
}
|
|
|
|
|
|
double CalcExpectedCounts(extmanager * MyManager, DdNode *Current, char *query_id, int calcdown_needed) {
|
|
|
|
// fprintf(stderr,"%%calcing up\n");
|
|
double ret = CalcExpectedCountsUp(MyManager, Current, query_id);
|
|
// fprintf(stderr,"%%result is %e\n",ret);
|
|
// fprintf(stderr,"%%calcing down\n");
|
|
|
|
if (calcdown_needed != 0) {
|
|
// double retd=CalcExpectedCountsDown(MyManager,Current, query_id);
|
|
}
|
|
/* if(1 != retd){ */
|
|
/* fprintf(stderr,"down %e != up %e/%e\n",ret,retd,ret); */
|
|
/* exit(1); */
|
|
/* } */
|
|
return ret;
|
|
}
|
|
|
|
|
|
/* ComparisonFunction compare_nodes ( extmanager MyManager) */
|
|
/* { */
|
|
/* //fprintf(stderr,"creating comparator for %p\n",MyManager); */
|
|
|
|
/* int comparator(void *av, void *bv){ */
|
|
/* fprintf(stderr,"========================> %p \n",MyManager); */
|
|
/* fprintf(stderr,"xxxxx \n"); */
|
|
/* DdNode* a = (DdNode*)av; */
|
|
/* DdNode* b = (DdNode*)bv; */
|
|
/* extmanager MyManager; */
|
|
/* int aindex,bindex, aperm, bperm; */
|
|
/* aindex=GetIndex(a); */
|
|
/* bindex=GetIndex(b); */
|
|
/* aperm=Cudd_IsConstant(a) ? CUDD_CONST_INDEX : Cudd_ReadPerm(MyManager.manager,aindex); */
|
|
/* Cudd_ReadPerm(MyManager.manager,bindex); */
|
|
/* bperm=Cudd_IsConstant(b) ? CUDD_CONST_INDEX : Cudd_ReadPerm(MyManager.manager,bindex); */
|
|
/* int temp = aperm-bperm; */
|
|
/* //-Cudd_ReadPerm(MyManager.manager,(*b).index);//-Cudd_ReadPerm(MyManager,b);// - Cudd_ReadPerm(b); */
|
|
/* //fprintf(stderr,"comparing3 %p %p %p\n",a,b,MyManager); */
|
|
/* // return -1; */
|
|
/* if (temp < 0) */
|
|
/* return 1; */
|
|
/* else if (temp > 0) */
|
|
/* return -1; */
|
|
/* // else //never return zero otherwise one is pruned away, or(?) */
|
|
/* // return 0; */
|
|
/* } */
|
|
|
|
/* // return (a<b) ? 1 : -1; */
|
|
/* return *comparator; */
|
|
/* } */
|
|
|
|
#define NODE_VALUE 1001
|
|
#define LOG_EXPECTED 0
|
|
|
|
|
|
static
|
|
void PrintNodeQueue(Queue q , extmanager MyManager){
|
|
|
|
QueueIterator qiter = QueueIteratorNew(q, 1);
|
|
fprintf(stderr,"Queue %p is [", q);
|
|
|
|
while (qiter->currentItem != NULL) {
|
|
DdNode* val = (DdNode*) qiter->currentItem->element;
|
|
QueueIteratorAdvance(qiter);
|
|
fprintf(stderr," %s %s", GetNodeVarNameDisp(MyManager.manager, MyManager.varmap, val),
|
|
(qiter->currentItem !=NULL)?",":"]\n");
|
|
}
|
|
|
|
}
|
|
/** also nesting in CalcExpected seems to not work (must be here nested only valid within function frame)*/
|
|
/* will be changed at later stage */
|
|
static extmanager * ineedtostorethatsomehow;
|
|
|
|
static
|
|
int comparator(void *av, void *bv){
|
|
int ret = 0;
|
|
DdNode* a = (DdNode*)av;
|
|
DdNode* b = (DdNode*)bv;
|
|
int aindex,bindex, aperm, bperm;
|
|
aindex=GetIndex(a);
|
|
bindex=GetIndex(b);
|
|
aperm=Cudd_IsConstant(a) ? CUDD_CONST_INDEX : Cudd_ReadPerm(ineedtostorethatsomehow->manager,aindex);
|
|
Cudd_ReadPerm(ineedtostorethatsomehow->manager,bindex);
|
|
bperm=Cudd_IsConstant(b) ? CUDD_CONST_INDEX : Cudd_ReadPerm(ineedtostorethatsomehow->manager,bindex);
|
|
int temp = -aperm+bperm;
|
|
if (temp < 0)
|
|
ret= 1;
|
|
else if (temp > 0)
|
|
ret= -1;
|
|
// else //never return zero otherwise one is pruned away, or(?)
|
|
// return 0;
|
|
if(LOG_EXPECTED){
|
|
fprintf(stderr,"perm(%s,%i)=%i perm(%s,%i)=%i => %i\n",GetNodeVarNameDisp(ineedtostorethatsomehow->manager, ineedtostorethatsomehow->varmap, a),
|
|
aindex,
|
|
aperm,
|
|
GetNodeVarNameDisp(ineedtostorethatsomehow->manager, ineedtostorethatsomehow->varmap, b),
|
|
bindex,bperm,
|
|
ret);}
|
|
|
|
return ret;
|
|
}
|
|
|
|
static void
|
|
skip_nodes_cnt(extmanager * MyManager, double (*counts)[] , int skipcnt, DdNode* l,double dprob, char *query_id);
|
|
|
|
/** output information for skipped nodes **/
|
|
static void
|
|
skip_nodes(extmanager * MyManager, double (*counts)[] , DdNode* node, DdNode* l,double dprob, char *query_id){
|
|
int skipcnt;
|
|
skipcnt = Cudd_ReadPerm(MyManager->manager,GetIndex(node))+1;
|
|
if(LOG_EXPECTED){fprintf(stderr,">> skipper >> %s=%i@%i of %i -> %i@%i %i\n",
|
|
(char *)(MyManager->varmap.dynvalue[GetIndex(node) - MyManager->varmap.varstart]),
|
|
GetIndex(node),
|
|
Cudd_ReadPerm(MyManager->manager,GetIndex(node)),
|
|
Cudd_ReadSize( MyManager->manager),
|
|
GetIndex(l),
|
|
Cudd_ReadPerm(MyManager->manager,GetIndex(l)),
|
|
Cudd_IsConstant(l)
|
|
);
|
|
}
|
|
skip_nodes_cnt( MyManager, counts, skipcnt, l, dprob, query_id);
|
|
}
|
|
|
|
static void
|
|
skip_nodes_cnt(extmanager * MyManager, double (*counts)[] , int skipcnt, DdNode* l,double dprob, char *query_id){
|
|
if(LOG_EXPECTED) fprintf(stderr,"====================\n");
|
|
double p;
|
|
int ivalue;
|
|
// fprintf(stderr, " skip (:%i) \n",__LINE__);
|
|
while(Cudd_IsConstant(l) ?
|
|
skipcnt < Cudd_ReadSize( MyManager->manager) // the terminals/leafs/constants will be ignored
|
|
:
|
|
skipcnt < Cudd_ReadPerm(MyManager->manager,GetIndex(l) )
|
|
){
|
|
skipcnt++;
|
|
if(LOG_EXPECTED){ fprintf(stderr,"skipcnt %i\n",skipcnt-1);}
|
|
int idx=Cudd_ReadInvPerm(MyManager->manager,skipcnt-1);
|
|
if(LOG_EXPECTED){fprintf(stderr,"index %i %i\n",idx,MyManager->varmap.varstart);}
|
|
//fprintf(stdout,"%i %s.\n",skipcnt,MyManager->varmap.dynvalue[GetIndex(node) - MyManager->varmap.varstart]);
|
|
if(LOG_EXPECTED){fprintf(stderr,"Node skipped level %i index: %i name: %s (dprob is %e)\n",
|
|
skipcnt,idx,
|
|
MyManager->varmap.vars[idx - MyManager->varmap.varstart],
|
|
dprob);}
|
|
//notiz
|
|
ivalue = MyManager->varmap.ivalue[idx - MyManager->varmap.varstart];
|
|
//+ new{
|
|
//double tvalue; // probability of prob fact corresp to node
|
|
//tvalue = MyManager->varmap.dvalue[idx - MyManager->varmap.varstart];
|
|
//}
|
|
if(ivalue==1){
|
|
p=dprob*MyManager->varmap.dvalue[idx - MyManager->varmap.varstart];
|
|
//+ new{
|
|
//p=dprob*MyManager->varmap.dvalue[idx - MyManager->varmap.varstart] *tvalue;
|
|
//}
|
|
if(p>0){// probability is zero, don't follow this branch
|
|
(*counts)[idx - MyManager->varmap.varstart]+=p;
|
|
// fprintf(stdout,"oec(%s,%s,%e). %%2\n",query_id,MyManager->varmap.vars[idx - MyManager->varmap.varstart],p);
|
|
if(LOG_EXPECTED) fprintf(stderr,"ec -> %s,%s,%e . %%2_1\n",query_id,MyManager->varmap.vars[idx - MyManager->varmap.varstart],p);
|
|
}else{
|
|
if(LOG_EXPECTED){fprintf(stdout,"%% ec(%s,%s,%30.30e). %%2_2\n",query_id,MyManager->varmap.vars[idx - MyManager->varmap.varstart],p);}
|
|
}
|
|
}
|
|
}
|
|
// fprintf(stderr, " skip %i \n",__LINE__);
|
|
if(LOG_EXPECTED){fprintf(stderr,"skipped\n");}
|
|
}
|
|
|
|
|
|
double CalcExpectedCountsDown(extmanager * MyManager, DdNode *Current, char *query_id) {
|
|
ineedtostorethatsomehow=MyManager;
|
|
Queue q = QueueNew();
|
|
//fprintf(stderr", =====> queue is: %p \n",q);
|
|
int i;
|
|
char *curnode, *curh, *curl,*dynvalue;
|
|
DdNode *h, *l, *node;
|
|
ComparisonFunction fun;
|
|
hisnode *Found = NULL,*lfound, *hfound;
|
|
double dprob; //downward probability of current node
|
|
double tvalue; // probability of prob fact corresp to node
|
|
int ivalue;
|
|
double retval; //last value of true
|
|
|
|
double counts[MyManager->varmap.varcnt] ;
|
|
double (*pcnt)[MyManager->varmap.varcnt];
|
|
pcnt = &counts;
|
|
for( i = 0 ;i< MyManager->varmap.varcnt ; i++){
|
|
(*pcnt)[i]=0;
|
|
}
|
|
// skip everything before the first node:
|
|
skip_nodes_cnt(MyManager,pcnt,0,Current,1,query_id);
|
|
|
|
|
|
fun = *comparator;
|
|
if(LOG_EXPECTED){fprintf(stderr," ##############################\n");}
|
|
if(LOG_EXPECTED){ fprintf(stderr," ##############################\n fun is %p\n",fun);}
|
|
if(!Cudd_IsConstant(Current)){
|
|
QueuePutOnPriority(q, Current, NODE_VALUE,fun);
|
|
Found = GetNode(MyManager->his, MyManager->varmap.varstart, Current);
|
|
(*Found).dvalue2=1.0/((*Found).dvalue);
|
|
dynvalue = (*Found).dynvalue;
|
|
}
|
|
Current= NULL; // not used anymore or should not be
|
|
retval=0;
|
|
|
|
while(QueueSize(q)>0){
|
|
if(LOG_EXPECTED){fprintf(stderr,"\n");}
|
|
if(LOG_EXPECTED){PrintNodeQueue(q,*MyManager);}
|
|
node=QueueGet(q);
|
|
curnode = GetNodeVarNameDisp(MyManager->manager, MyManager->varmap, node);
|
|
// int level = Cudd_ReadPerm(MyManager->manager,GetIndex(node));
|
|
if(!Cudd_IsConstant(node)){
|
|
tvalue = MyManager->varmap.dvalue[GetIndex(node) - MyManager->varmap.varstart];
|
|
ivalue = MyManager->varmap.ivalue[GetIndex(node) - MyManager->varmap.varstart];
|
|
dynvalue = MyManager->varmap.vars[GetIndex(node) - MyManager->varmap.varstart];
|
|
Found = GetNode(MyManager->his, MyManager->varmap.varstart, node);
|
|
dprob=(*Found).dvalue2;
|
|
l = LowNodeOf(MyManager->manager, node);
|
|
h = HighNodeOf(MyManager->manager, node);
|
|
lfound = GetNode(MyManager->his, MyManager->varmap.varstart, l);
|
|
hfound = GetNode(MyManager->his, MyManager->varmap.varstart, h) ;
|
|
curh = GetNodeVarNameDisp(MyManager->manager, MyManager->varmap, h);
|
|
curl = GetNodeVarNameDisp(MyManager->manager, MyManager->varmap, l);
|
|
|
|
if(LOG_EXPECTED){fprintf(stderr, "%s (%i)--> %s %s\n", curnode,(*node).index,curh,curl);}
|
|
/** low node */
|
|
if((*lfound).dvalue2<-0.1){ //only if not seen before == dvalue2=0 (almost) otherwise requing does not harm
|
|
if(LOG_EXPECTED){fprintf(stderr,"queueing l(%s)=%s \n",curnode,curl);}
|
|
QueuePutOnPriority(q, l, NODE_VALUE,fun);
|
|
(*lfound).dvalue2=0;
|
|
}
|
|
((*lfound).dvalue2)=((*lfound).dvalue2)+(ivalue==0? dprob : dprob*(1-tvalue));
|
|
if(LOG_EXPECTED){fprintf(stderr, "l(%s)=%s %e \n", curnode,curl,(*lfound).dvalue2);}
|
|
if(LOG_EXPECTED){fprintf(stderr, "l(%s)=%s %e %e %e\n", curnode,curl,(*lfound).dvalue2,tvalue,dprob);}
|
|
|
|
/** high node */
|
|
if((*hfound).dvalue2<-0.1){ //only if not seen before == dvalue2=0 (almost) otherwise requing does not harm
|
|
fun = *comparator;
|
|
(*fun)(l,l);
|
|
if(LOG_EXPECTED){
|
|
PrintNodeQueue(q,*MyManager);
|
|
fprintf(stderr,"-> %p\n",h);
|
|
}
|
|
QueuePutOnPriority(q, h, NODE_VALUE,fun);
|
|
(*hfound).dvalue2=0;
|
|
}
|
|
(*hfound).dvalue2=(*hfound).dvalue2+(ivalue==0? dprob : (dprob*(tvalue)));
|
|
if(LOG_EXPECTED){fprintf(stderr, "h(%s)=%s %e %e %e\n", curnode,curh,(*hfound).dvalue2,tvalue,dprob);}
|
|
/** output expected counts current node */
|
|
if(ivalue==1){
|
|
(*pcnt)[GetIndex(node) - MyManager->varmap.varstart]+=dprob * tvalue * (*hfound).dvalue;
|
|
//fprintf(stdout,"oec(%s,%s,%e). %% 1_1\n",query_id,dynvalue,dprob * tvalue * (*hfound).dvalue);
|
|
if(LOG_EXPECTED) fprintf(stderr,"ec -> %s,%s,%e . %% 1_1\n",query_id,dynvalue,dprob * tvalue * (*hfound).dvalue);
|
|
}else{
|
|
(*pcnt)[GetIndex(node) - MyManager->varmap.varstart]+=dprob * tvalue * (*hfound).dvalue;
|
|
if(LOG_EXPECTED) fprintf(stderr,"ec -> %s,%s,%e . %% 1_2\n",query_id,dynvalue,dprob * tvalue * (*hfound).dvalue);
|
|
}
|
|
/** output expected counts of skipped nodes for low branch*/
|
|
skip_nodes(MyManager,pcnt,node,l,dprob*((ivalue==0)?1:(1-tvalue))*(*lfound).dvalue,query_id);
|
|
skip_nodes(MyManager,pcnt,node,h,dprob*((ivalue==0)?1:(tvalue))*(*hfound).dvalue,query_id);
|
|
}else{
|
|
if(LOG_EXPECTED){fprintf(stderr,"here: retval %s %e=>%e\n",curnode,retval,(*Found).dvalue2);}
|
|
if(node==(MyManager->t)){
|
|
if(LOG_EXPECTED){fprintf(stderr,"updating retval %e=>%e\n",retval,(*Found).dvalue2);}
|
|
retval=(*Found).dvalue2;
|
|
}
|
|
|
|
}
|
|
}
|
|
for( i = 0 ;i< MyManager->varmap.varcnt ; i++){
|
|
ivalue = MyManager->varmap.ivalue[i];
|
|
/* fprintf(stderr,"Node level %i index: %i name: %s (dprob is %e)\n", */
|
|
/* i,idx, */
|
|
/* MyManager->varmap.vars[idx - MyManager->varmap.varstart], */
|
|
/* dprob); */
|
|
//fprintf(stderr,"Node idx: %i level: %i \n",i,Cudd_ReadPerm(MyManager->manager,i));
|
|
if(ivalue==0){
|
|
fprintf(stdout,"%% det: ec(%s,%s,%30.30e).\n",query_id,MyManager->varmap.vars[i],(counts)[i]);
|
|
}else{
|
|
fprintf(stdout,"ec(%s,%s,%30.30e).\n",query_id,MyManager->varmap.vars[i],(counts)[i]);
|
|
|
|
}
|
|
}
|
|
// free(counts);
|
|
if(LOG_EXPECTED){
|
|
fprintf(stderr,"retval is %e\n",retval);
|
|
}
|
|
return retval;
|
|
}
|
|
|
|
double CalcExpectedCountsUp(extmanager * MyManager, DdNode *Current, char *query_id) {
|
|
// fprintf(stderr,"--------------------- the manager 2 %p \n",&MyManager);
|
|
|
|
DdNode *h, *l;
|
|
hisnode *Found;
|
|
char *curnode = NULL;
|
|
double lvalue, hvalue, tvalue;
|
|
// tvalue=0.0;
|
|
int ivalue;
|
|
if (params.debug) {
|
|
curnode = GetNodeVarNameDisp(MyManager->manager, MyManager->varmap, Current);
|
|
fprintf(stderr, "%s\n", curnode);
|
|
}
|
|
|
|
if (Current == MyManager->t){
|
|
// if ((Found = GetNode(MyManager->his, MyManager->varmap.varstart, Current)) == NULL) {
|
|
// fprintf(stderr,"adding true \n");
|
|
AddNode(MyManager->his, MyManager->varmap.varstart, MyManager->t, 1, 0, NULL);//}//needed in down
|
|
return 1.0;
|
|
}
|
|
if (Current == MyManager->f){
|
|
// fprintf(stderr,"adding false \n");
|
|
// if ((Found = GetNode(MyManager->his, MyManager->varmap.varstart, Current)) == NULL) {
|
|
AddNode(MyManager->his, MyManager->varmap.varstart, MyManager->f, 0, 0, NULL);//}//needed in down
|
|
return 0.0;
|
|
}
|
|
|
|
if ((Found = GetNode(MyManager->his, MyManager->varmap.varstart, Current)) != NULL) return Found->dvalue;
|
|
l = LowNodeOf(MyManager->manager, Current);
|
|
h = HighNodeOf(MyManager->manager, Current);
|
|
if (params.debug) fprintf(stderr, "l(%s)->", curnode);
|
|
lvalue = CalcExpectedCountsUp(MyManager, l,query_id);
|
|
if (params.debug) fprintf(stderr, "h(%s)->", curnode);
|
|
hvalue = CalcExpectedCountsUp(MyManager, h,query_id);
|
|
|
|
|
|
tvalue = MyManager->varmap.dvalue[GetIndex(Current) - MyManager->varmap.varstart];
|
|
//notiz
|
|
ivalue = MyManager->varmap.ivalue[GetIndex(Current) - MyManager->varmap.varstart];
|
|
|
|
if(ivalue == 1){
|
|
tvalue = tvalue * hvalue + lvalue * (1.0 - tvalue);
|
|
}else if (ivalue == 0){
|
|
tvalue = hvalue + lvalue ;
|
|
}
|
|
// fprintf(stderr," ---> %e \n",tvalue);
|
|
AddNode(MyManager->his, MyManager->varmap.varstart, Current, tvalue, 0, NULL);
|
|
return tvalue;
|
|
}
|
|
|
|
|
|
/* Bernds Algorithm */
|
|
// type=0 regular probabilistic fact
|
|
// type=1 derive gradient for mu
|
|
// type=2 derive gradient for sigma
|
|
gradientpair CalcGradient(extmanager MyManager, DdNode *Current, int TargetVar, char *TargetPattern, int type) {
|
|
DdNode *h, *l;
|
|
hisnode *Found;
|
|
char *curnode = NULL, *dynvalue;
|
|
gradientpair lowvalue, highvalue, tvalue;
|
|
double this_probability;
|
|
double *gradient;
|
|
density_integral dynvalue_parsed;
|
|
|
|
if (params.debug) {
|
|
curnode = GetNodeVarNameDisp(MyManager.manager, MyManager.varmap, Current);
|
|
fprintf(stderr, "%s\n", curnode);
|
|
}
|
|
// base cases
|
|
if (Current == MyManager.t) {
|
|
tvalue.probability = 1.0;
|
|
tvalue.gradient = 0.0;
|
|
return tvalue;
|
|
}
|
|
if (Current == MyManager.f) {
|
|
tvalue.probability = 0.0;
|
|
tvalue.gradient = 0.0;
|
|
return tvalue;
|
|
}
|
|
//node is in cache
|
|
if ((Found = GetNode(MyManager.his, MyManager.varmap.varstart, Current)) != NULL) {
|
|
tvalue.probability = Found->dvalue;
|
|
tvalue.gradient = *((double *) Found->dynvalue);
|
|
return tvalue;
|
|
}
|
|
|
|
//inductive case
|
|
l = LowNodeOf(MyManager.manager, Current);
|
|
h = HighNodeOf(MyManager.manager, Current);
|
|
if (params.debug) fprintf(stderr, "l(%s)->", curnode);
|
|
lowvalue = CalcGradient(MyManager, l, TargetVar, TargetPattern,type);
|
|
if (params.debug) fprintf(stderr, "h(%s)->", curnode);
|
|
highvalue = CalcGradient(MyManager, h, TargetVar, TargetPattern,type);
|
|
dynvalue = (char*) MyManager.varmap.dynvalue[GetIndex(Current) - MyManager.varmap.varstart];
|
|
if (dynvalue == NULL) { // no dynvalue, it's a regular probabilistic fact
|
|
memset( &dynvalue_parsed, 0, sizeof(dynvalue_parsed) );
|
|
this_probability = sigmoid(MyManager.varmap.dvalue[GetIndex(Current) - MyManager.varmap.varstart], params.sigmoid_slope);
|
|
} else { // there is a dynvalue, it's a continuous fact! let's do the hybrid ProbLog magic here
|
|
curnode = GetNodeVarNameDisp(MyManager.manager, MyManager.varmap, Current);
|
|
dynvalue_parsed = parse_density_integral_string(dynvalue, curnode);
|
|
this_probability=cumulative_normal(dynvalue_parsed.low,dynvalue_parsed.high,dynvalue_parsed.mu,dynvalue_parsed.sigma);
|
|
}
|
|
|
|
tvalue.probability = this_probability * highvalue.probability + (1 - this_probability) * lowvalue.probability;
|
|
tvalue.gradient = this_probability * highvalue.gradient + (1 - this_probability) * lowvalue.gradient;
|
|
if ((GetIndex(Current) == TargetVar) ||
|
|
((TargetPattern != NULL) && patternmatch(TargetPattern, MyManager.varmap.vars[GetIndex(Current)]))) {
|
|
if (type == 0) { // current node is normal probabilistic fact
|
|
tvalue.gradient += (highvalue.probability - lowvalue.probability) * this_probability * (1 - this_probability) * params.sigmoid_slope;
|
|
} else if (type == 1) { // it's a continues fact and we need d/dmu
|
|
tvalue.gradient += cumulative_normal_dmu(dynvalue_parsed.low, dynvalue_parsed.high, dynvalue_parsed.mu, dynvalue_parsed.sigma) * (highvalue.probability + lowvalue.probability);
|
|
} else if (type == 2) { // it's a continues fact and we need d/dsigma
|
|
tvalue.gradient += cumulative_normal_dsigma(dynvalue_parsed.low, dynvalue_parsed.high, dynvalue_parsed.mu, dynvalue_parsed.sigma) * (highvalue.probability + lowvalue.probability);
|
|
}
|
|
}
|
|
gradient = (double *) malloc(sizeof(double));
|
|
*gradient = tvalue.gradient;
|
|
AddNode(MyManager.his, MyManager.varmap.varstart, Current, tvalue.probability, 0, gradient);
|
|
return tvalue;
|
|
}
|
|
|
|
char * extractpattern(const char *thestr) {
|
|
char *p;
|
|
int i = 0, sl = strlen(thestr);
|
|
while((thestr[i] != '_') && (i < sl)) i++;
|
|
if (i == sl) return NULL;
|
|
i++;
|
|
p = (char *) malloc(sizeof(char) * (i + 2));
|
|
strncpy(p, thestr, i);
|
|
p[i] = '*';
|
|
p[i + 1] = '\0';
|
|
return p;
|
|
}
|
|
|
|
int patterncalculated(char *pattern, extmanager MyManager, int loc) {
|
|
int i;
|
|
if (pattern == NULL) return 0;
|
|
for (i = loc - 1; i > -1; i--)
|
|
if (patternmatch(pattern, MyManager.varmap.vars[i])) return 1;
|
|
return 0;
|
|
}
|