Use tabs instead of spaces for consistency
This commit is contained in:
Tiago Gomes
parent
d03ea1509e
commit
2738c0fb56
@ -5,34 +5,34 @@
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********************************************************/
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:- module(clpbn_horus,
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[set_solver/1,
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set_horus_flag/1,
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cpp_create_lifted_network/3,
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cpp_create_ground_network/4,
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cpp_set_parfactors_params/2,
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cpp_set_factors_params/2,
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cpp_run_lifted_solver/3,
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cpp_run_ground_solver/3,
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cpp_set_vars_information/2,
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cpp_set_horus_flag/2,
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cpp_free_lifted_network/1,
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cpp_free_ground_network/1
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]).
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[set_solver/1,
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set_horus_flag/1,
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cpp_create_lifted_network/3,
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cpp_create_ground_network/4,
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cpp_set_parfactors_params/2,
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cpp_set_factors_params/2,
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cpp_run_lifted_solver/3,
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cpp_run_ground_solver/3,
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cpp_set_vars_information/2,
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cpp_set_horus_flag/2,
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cpp_free_lifted_network/1,
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cpp_free_ground_network/1
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]).
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:- use_module(library(clpbn),
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[set_clpbn_flag/2]).
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[set_clpbn_flag/2]).
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patch_things_up :-
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assert_static(clpbn_horus:cpp_set_horus_flag(_,_)).
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assert_static(clpbn_horus:cpp_set_horus_flag(_,_)).
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warning :-
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format(user_error,"Horus library not installed: cannot use bp, fove~n.",[]).
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format(user_error,"Horus library not installed: cannot use bp, fove~n.",[]).
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:- catch(load_foreign_files([horus], [], init_predicates), _, patch_things_up)
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-> true ; warning.
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-> true ; warning.
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set_solver(ve) :- !, set_clpbn_flag(solver,ve).
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@ -1,46 +1,46 @@
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/*******************************************************
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Interface to Horus Ground Solvers. Used by:
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- Variable Elimination
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- Belief Propagation
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- Counting Belief Propagation
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- Variable Elimination
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- Belief Propagation
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- Counting Belief Propagation
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********************************************************/
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:- module(clpbn_horus_ground,
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[call_horus_ground_solver/6,
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check_if_horus_ground_solver_done/1,
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init_horus_ground_solver/5,
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run_horus_ground_solver/3,
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finalize_horus_ground_solver/1
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]).
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[call_horus_ground_solver/6,
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check_if_horus_ground_solver_done/1,
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init_horus_ground_solver/5,
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run_horus_ground_solver/3,
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finalize_horus_ground_solver/1
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]).
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:- use_module(horus,
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[cpp_create_ground_network/4,
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cpp_set_factors_params/2,
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cpp_run_ground_solver/3,
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cpp_set_vars_information/2,
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cpp_free_ground_network/1,
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set_solver/1
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]).
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[cpp_create_ground_network/4,
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cpp_set_factors_params/2,
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cpp_run_ground_solver/3,
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cpp_set_vars_information/2,
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cpp_free_ground_network/1,
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set_solver/1
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]).
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:- use_module(library('clpbn/dists'),
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[dist/4,
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get_dist_domain/2,
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get_dist_domain_size/2,
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get_dist_params/2
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]).
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[dist/4,
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get_dist_domain/2,
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get_dist_domain_size/2,
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get_dist_params/2
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]).
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:- use_module(library('clpbn/display'),
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[clpbn_bind_vals/3]).
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[clpbn_bind_vals/3]).
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:- use_module(library('clpbn/numbers')).
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:- use_module(library(charsio),
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[term_to_atom/2]).
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[term_to_atom/2]).
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:- use_module(library(pfl),
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[skolem/2]).
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[skolem/2]).
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:- use_module(library(maplist)).
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@ -52,32 +52,32 @@
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call_horus_ground_solver(QueryVars, QueryKeys, AllKeys, Factors, Evidence, Output) :-
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init_horus_ground_solver(QueryKeys, AllKeys, Factors, Evidence, State),
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run_horus_ground_solver([QueryKeys], Solutions, State),
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clpbn_bind_vals([QueryVars], Solutions, Output),
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finalize_horus_ground_solver(State).
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init_horus_ground_solver(QueryKeys, AllKeys, Factors, Evidence, State),
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run_horus_ground_solver([QueryKeys], Solutions, State),
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clpbn_bind_vals([QueryVars], Solutions, Output),
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finalize_horus_ground_solver(State).
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run_horus_ground_solver(QueryKeys, Solutions, state(Network,Hash,Id)) :-
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%get_dists_parameters(DistIds, DistsParams),
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%cpp_set_factors_params(Network, DistsParams),
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lists_of_keys_to_ids(QueryKeys, QueryIds, Hash, _, Id, _),
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cpp_run_ground_solver(Network, QueryIds, Solutions).
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%get_dists_parameters(DistIds, DistsParams),
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%cpp_set_factors_params(Network, DistsParams),
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lists_of_keys_to_ids(QueryKeys, QueryIds, Hash, _, Id, _),
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cpp_run_ground_solver(Network, QueryIds, Solutions).
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init_horus_ground_solver(QueryKeys, AllKeys, Factors, Evidence, state(Network,Hash4,Id4)) :-
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get_factors_type(Factors, Type),
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keys_to_numbers(AllKeys, Factors, Evidence, Hash4, Id4, FactorIds, EvidenceIds),
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cpp_create_ground_network(Type, FactorIds, EvidenceIds, Network),
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%writeln(network:(Type, FactorIds, EvidenceIds, Network)), writeln(''),
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maplist(get_var_information, AllKeys, StatesNames),
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maplist(term_to_atom, AllKeys, KeysAtoms),
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cpp_set_vars_information(KeysAtoms, StatesNames).
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get_factors_type(Factors, Type),
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keys_to_numbers(AllKeys, Factors, Evidence, Hash4, Id4, FactorIds, EvidenceIds),
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cpp_create_ground_network(Type, FactorIds, EvidenceIds, Network),
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%writeln(network:(Type, FactorIds, EvidenceIds, Network)), writeln(''),
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maplist(get_var_information, AllKeys, StatesNames),
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maplist(term_to_atom, AllKeys, KeysAtoms),
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cpp_set_vars_information(KeysAtoms, StatesNames).
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% TODO this is not beeing called!
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finalize_horus_ground_solver(state(Network,_Hash,_Id)) :-
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cpp_free_ground_network(Network).
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cpp_free_ground_network(Network).
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get_factors_type([f(bayes, _, _)|_], bayes) :- ! .
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@ -85,13 +85,13 @@ get_factors_type([f(markov, _, _)|_], markov) :- ! .
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get_var_information(_:Key, Domain) :- !,
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skolem(Key, Domain).
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skolem(Key, Domain).
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get_var_information(Key, Domain) :-
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skolem(Key, Domain).
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skolem(Key, Domain).
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%get_dists_parameters([],[]).
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%get_dists_parameters([Id|Ids], [dist(Id, Params)|DistsInfo]) :-
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% get_dist_params(Id, Params),
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% get_dists_parameters(Ids, DistsInfo).
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% get_dist_params(Id, Params),
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% get_dists_parameters(Ids, DistsInfo).
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@ -1,67 +1,67 @@
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/*******************************************************
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Interface to Horus Lifted Solvers. Used by:
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- Generalized Counting First-Order Variable Elimination (GC-FOVE)
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- Lifted First-Order Belief Propagation
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- Lifted First-Order Knowledge Compilation
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- Generalized Counting First-Order Variable Elimination (GC-FOVE)
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- Lifted First-Order Belief Propagation
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- Lifted First-Order Knowledge Compilation
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********************************************************/
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:- module(clpbn_horus_lifted,
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[call_horus_lifted_solver/3,
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check_if_horus_lifted_solver_done/1,
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init_horus_lifted_solver/4,
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run_horus_lifted_solver/3,
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finalize_horus_lifted_solver/1
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]).
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[call_horus_lifted_solver/3,
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check_if_horus_lifted_solver_done/1,
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init_horus_lifted_solver/4,
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run_horus_lifted_solver/3,
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finalize_horus_lifted_solver/1
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]).
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:- use_module(horus,
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[cpp_create_lifted_network/3,
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cpp_set_parfactors_params/2,
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cpp_run_lifted_solver/3,
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cpp_free_lifted_network/1
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]).
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[cpp_create_lifted_network/3,
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cpp_set_parfactors_params/2,
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cpp_run_lifted_solver/3,
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cpp_free_lifted_network/1
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]).
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:- use_module(library('clpbn/display'),
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[clpbn_bind_vals/3]).
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[clpbn_bind_vals/3]).
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:- use_module(library('clpbn/dists'),
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[get_dist_params/2]).
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[get_dist_params/2]).
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:- use_module(library(pfl),
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[factor/6,
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skolem/2,
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get_pfl_parameters/2
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]).
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[factor/6,
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skolem/2,
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get_pfl_parameters/2
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]).
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call_horus_lifted_solver(QueryVars, AllVars, Output) :-
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init_horus_lifted_solver(_, AllVars, _, State),
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run_horus_lifted_solver(QueryVars, Solutions, State),
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clpbn_bind_vals(QueryVars, Solutions, Output),
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finalize_horus_lifted_solver(State).
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init_horus_lifted_solver(_, AllVars, _, State),
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run_horus_lifted_solver(QueryVars, Solutions, State),
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clpbn_bind_vals(QueryVars, Solutions, Output),
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finalize_horus_lifted_solver(State).
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init_horus_lifted_solver(_, AllVars, _, state(ParfactorList, DistIds)) :-
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get_parfactors(Parfactors),
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get_dist_ids(Parfactors, DistIds0),
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sort(DistIds0, DistIds),
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get_observed_vars(AllVars, ObservedVars),
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%writeln(parfactors:Parfactors:'\n'),
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%writeln(evidence:ObservedVars:'\n'),
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cpp_create_lifted_network(Parfactors, ObservedVars, ParfactorList).
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get_parfactors(Parfactors),
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get_dist_ids(Parfactors, DistIds0),
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sort(DistIds0, DistIds),
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get_observed_vars(AllVars, ObservedVars),
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%writeln(parfactors:Parfactors:'\n'),
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%writeln(evidence:ObservedVars:'\n'),
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cpp_create_lifted_network(Parfactors, ObservedVars, ParfactorList).
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run_horus_lifted_solver(QueryVars, Solutions, state(ParfactorList, DistIds)) :-
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get_query_keys(QueryVars, QueryKeys),
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get_dists_parameters(DistIds, DistsParams),
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%writeln(dists:DistsParams), writeln(''),
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cpp_set_parfactors_params(ParfactorList, DistsParams),
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cpp_run_lifted_solver(ParfactorList, QueryKeys, Solutions).
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get_query_keys(QueryVars, QueryKeys),
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get_dists_parameters(DistIds, DistsParams),
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%writeln(dists:DistsParams), writeln(''),
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cpp_set_parfactors_params(ParfactorList, DistsParams),
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cpp_run_lifted_solver(ParfactorList, QueryKeys, Solutions).
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finalize_horus_lifted_solver(state(ParfactorList, _)) :-
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cpp_free_lifted_network(ParfactorList).
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cpp_free_lifted_network(ParfactorList).
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:- table get_parfactors/1.
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@ -77,72 +77,73 @@ finalize_horus_lifted_solver(state(ParfactorList, _)) :-
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% Tuples: ground bindings for variables in Vs, of the form [fv(x,y)]
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%
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get_parfactors(Factors) :-
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findall(F, is_factor(F), Factors).
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findall(F, is_factor(F), Factors).
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is_factor(pf(Id, Ks, Rs, Phi, Tuples)) :-
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factor(_Type, Id, Ks, Vs, Table, Constraints),
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get_ranges(Ks,Rs),
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Table \= avg,
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gen_table(Table, Phi),
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all_tuples(Constraints, Vs, Tuples).
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factor(_Type, Id, Ks, Vs, Table, Constraints),
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get_ranges(Ks,Rs),
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Table \= avg,
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gen_table(Table, Phi),
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all_tuples(Constraints, Vs, Tuples).
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get_ranges([],[]).
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get_ranges(K.Ks, Range.Rs) :- !,
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skolem(K,Domain),
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length(Domain,Range),
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get_ranges(Ks, Rs).
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skolem(K,Domain),
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length(Domain,Range),
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get_ranges(Ks, Rs).
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gen_table(Table, Phi) :-
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( is_list(Table)
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->
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Phi = Table
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;
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call(user:Table, Phi)
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).
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(
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is_list(Table)
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->
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Phi = Table
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;
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call(user:Table, Phi)
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).
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all_tuples(Constraints, Tuple, Tuples) :-
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setof(Tuple, Constraints^run(Constraints), Tuples).
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setof(Tuple, Constraints^run(Constraints), Tuples).
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run([]).
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run(Goal.Constraints) :-
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user:Goal,
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run(Constraints).
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user:Goal,
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run(Constraints).
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get_dist_ids([], []).
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get_dist_ids(pf(Id, _, _, _, _).Parfactors, Id.DistIds) :-
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get_dist_ids(Parfactors, DistIds).
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get_dist_ids(Parfactors, DistIds).
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get_observed_vars([], []).
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get_observed_vars(V.AllAttVars, [K:E|ObservedVars]) :-
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clpbn:get_atts(V,[key(K)]),
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( clpbn:get_atts(V,[evidence(E)]) ; pfl:evidence(K,E) ), !,
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get_observed_vars(AllAttVars, ObservedVars).
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clpbn:get_atts(V,[key(K)]),
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( clpbn:get_atts(V,[evidence(E)]) ; pfl:evidence(K,E) ), !,
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get_observed_vars(AllAttVars, ObservedVars).
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get_observed_vars(V.AllAttVars, ObservedVars) :-
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clpbn:get_atts(V,[key(_K)]), !,
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get_observed_vars(AllAttVars, ObservedVars).
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clpbn:get_atts(V,[key(_K)]), !,
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get_observed_vars(AllAttVars, ObservedVars).
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get_query_keys([], []).
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get_query_keys(E1.L1, E2.L2) :-
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get_query_keys_2(E1,E2),
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get_query_keys(L1, L2).
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get_query_keys_2(E1,E2),
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get_query_keys(L1, L2).
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get_query_keys_2([], []).
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get_query_keys_2(V.AttVars, [RV|RVs]) :-
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clpbn:get_atts(V,[key(RV)]), !,
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get_query_keys_2(AttVars, RVs).
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clpbn:get_atts(V,[key(RV)]), !,
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get_query_keys_2(AttVars, RVs).
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get_dists_parameters([], []).
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get_dists_parameters([Id|Ids], [dist(Id, Params)|DistsInfo]) :-
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get_pfl_parameters(Id, Params),
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get_dists_parameters(Ids, DistsInfo).
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get_pfl_parameters(Id, Params),
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get_dists_parameters(Ids, DistsInfo).
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