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683 Commits

Author SHA1 Message Date
Tiago Gomes
761406fa46 Small updates to html docs 2013-04-13 12:33:48 +01:00
Tiago Gomes
745a034d43 Reduce the size of the section labels 2013-04-13 00:49:59 +01:00
Tiago Gomes
cb6715664b Create a HTML version of the manual 2013-04-12 23:49:12 +01:00
Tiago Gomes
3405a8895b Small updates to manual 2013-04-12 23:48:25 +01:00
Tiago Gomes
fc2530fbe2 It appears that 'make install' on top level calls 'make all' on the horus makefile 2013-04-11 23:16:51 +01:00
Tiago Gomes
7ecfb999d5 Style change 2013-04-11 23:06:13 +01:00
Tiago Gomes
de6d7981fb Merge branch 'master' of ssh://yap.git.sourceforge.net/gitroot/yap/yap-6.3 2013-04-11 22:28:41 +01:00
Vítor Santos Costa
23d2f7b8e5 more cleanups. 2013-04-07 10:40:42 -05:00
Vítor Santos Costa
4a95575fe1 should always lookup who generates the parameters (not supported in learning). 2013-04-07 09:51:20 -05:00
Vítor Santos Costa
4ab4f1cab1 allow integer parameters. 2013-04-07 08:18:13 -05:00
Tiago Gomes
a2e54a235a Factor: improve factor multiplication 
Pass the argument as reference-to-const and also allow chaining of multiplications.
 2013-03-21 21:49:12 +00:00
Tiago Gomes
6da2580c8f Fix c550139c8b 2013-03-21 21:43:27 +00:00
Tiago Gomes
e2ca97c8de Factor: use the default copy constructor 2013-03-21 21:20:28 +00:00
Tiago Gomes
389daab83f Oops 2013-03-21 19:29:24 +00:00
Tiago Gomes
da88ffcc78 Watch out for undefined behaviour. 2013-03-18 16:18:47 +00:00
Tiago Gomes
c550139c8b Add more assertations to Factor class. 
SumOutFirstVariable and SumOutLastVariable will only are correctly defined if the variable is binary.
 2013-03-18 15:57:10 +00:00
Tiago Gomes
4ca17b9e9b Turn off debug by default 2013-03-18 15:08:06 +00:00
Tiago Gomes
acf83dd0a1 Add some unit tests 2013-03-18 14:42:54 +00:00
Tiago Gomes
403695a7ba Ouch! We were deleting the same links twice 2013-03-18 12:56:36 +00:00
Tiago Gomes
07dba92406 Add a more complex example to be used by unit tests 2013-03-18 11:33:27 +00:00
Tiago Gomes
bc04d28092 Use a static method to create a FactorGraph 2013-03-14 16:57:34 +00:00
Tiago Gomes
2ef1651c6a Add more 2 digits of precision 2013-03-14 16:55:20 +00:00
Tiago Gomes
b5d72f751e We need to reverse the ranges too 2013-03-13 23:22:38 +00:00
Tiago Gomes
d3663d9370 Forgot to call exit 2013-03-13 22:37:04 +00:00
Tiago Gomes
23469e6f94 Initial infrastructure to support CppUnit 2013-03-13 14:47:14 +00:00
Tiago Gomes
5e5feb5674 Improve Makefile 2013-03-12 21:11:43 +00:00
Tiago Gomes
21c401c0dd Move CTNode class to sourcef file 2013-03-09 19:41:17 +00:00
Tiago Gomes
2da7249247 Trivial 2013-03-09 17:14:00 +00:00
Tiago Gomes
a300b27764 BeliefProp: move some members to private section 2013-03-09 16:46:42 +00:00
Tiago Gomes
95539226ea Kill SPNodeInfo class 2013-03-09 16:41:53 +00:00
Tiago Gomes
d563fce952 Var: replace struct by a pair 2013-03-09 16:18:13 +00:00
Tiago Gomes
532654baba Use enum class instead of old enum. 
As we are relying on c++11x for other stuff too.
 2013-03-09 15:39:39 +00:00
Tiago Gomes
7193d2238d Move template definitions to source file and use explicite template instantiation. 2013-03-04 17:58:32 +00:00
Tiago Gomes
063f3ff6e3 Forgot to add these two in the previous commit 2013-03-04 17:57:56 +00:00
Tiago Gomes
93fa793683 Separate TFactor and Factor classes. 
Rename TFactor to GenericFactor. GenericFactor.cpp is empty for now.
 2013-03-04 15:47:47 +00:00
Tiago Gomes
98efd54da7 Remove unused member function 2013-03-04 15:10:51 +00:00
Tiago Gomes
902624f557 f(void) vs f() 
"In fact, the f(void) style has been called an "abomination" by Bjarne Stroustrup, the creator of C++, Dennis Ritchie, the co-creator of C, and Doug McIlroy, head of the research department where Unix was born."
 2013-02-28 19:45:37 +00:00
Tiago Gomes
c8b639f495 Define sortByParams as a local class 2013-02-22 12:35:14 +00:00
Tiago Gomes
0991a84793 Move sortByParams to source file 2013-02-21 00:13:11 +00:00
Tiago Gomes
59c6f5c243 DISALLOW_COPY_AND_ASSIGN should be in the end 2013-02-21 00:06:34 +00:00
Tiago Gomes
f0572e3cfb Move BpLink to inside of BeliefProp 2013-02-20 23:59:03 +00:00
Tiago Gomes
6b0e125e3b Move MsgSchedule enum to inside class BeliefProp. 
Move also SPNodeInfo to inside BeliefProp. Improve also some using of enums.
 2013-02-20 23:34:03 +00:00
Tiago Gomes
ce8152d7a0 Add a comment explaining why we are inlining functions with loops in ElimGraph 2013-02-20 23:08:12 +00:00
Tiago Gomes
1d54a78601 BayesBall: improve encapsulation 2013-02-20 14:13:37 +00:00
Tiago Gomes
9a68d95c18 Turn EGNode to be a nested class inside ElimGraph 2013-02-20 13:49:01 +00:00
Tiago Gomes
8ca379c74a Move ElimHeuristic enum to inside of ElimGraph class 2013-02-20 12:52:55 +00:00
Tiago Gomes
8de22f4f0b Counting Bp: move internal classes to source file 2013-02-20 12:42:05 +00:00
Tiago Gomes
8c2468c28b Improve encapsulation in HorusYap and perform other small refactorings 2013-02-20 11:52:42 +00:00
Tiago Gomes
77dfe50acb LiftedVe: move internal classes to source file 2013-02-20 00:21:01 +00:00
Tiago Gomes
7edfe44576 WeightedBp: remove unnecessary include 2013-02-20 00:13:15 +00:00
Tiago Gomes
74a9eda09d HorusCli: put internal functions in an anonymous namespace 2013-02-20 00:05:45 +00:00
Tiago Gomes
e3439af0a0 LiftedKc: improve header include 2013-02-19 23:59:05 +00:00
Tiago Gomes
e434e87cc8 LiftedKc: remove unnecessary data members 2013-02-19 23:57:22 +00:00
Tiago Gomes
c9543514c5 LiftedKc: move some internal classes to source file 2013-02-19 23:47:46 +00:00
Tiago Gomes
b6ee7b4460 Don't extend explicity the life time of returned temporaries. 
That sort of optimization is compiler's work.
 2013-02-16 18:58:22 +00:00
Tiago Gomes
ea49b517e8 Some renamings in ElimGraph 2013-02-16 17:03:12 +00:00
Tiago Gomes
ba79d2e422 Add a source file for Indexer class 
- Move some non-performance critical methods to the source file
- Fix some implicit declarions of members in iomanip
- Fix declaration order in Makefile.in
 2013-02-16 16:42:08 +00:00
Tiago Gomes
0852c4fe22 Clean ups 2013-02-16 16:17:14 +00:00
Tiago Gomes
d0f5d0f9ab Change LiftedOperations to be a namespace instead of class with static member functions 2013-02-16 16:00:53 +00:00
Tiago Gomes
be24ff5160 Fix typos 2013-02-16 15:30:44 +00:00
Tiago Gomes
acb4bf610f Clean HorusYap a bit 2013-02-16 01:54:11 +00:00
Tiago Gomes
bf1ba17855 Fix typos detected by cppcheck 2013-02-13 23:47:00 +00:00
Tiago Gomes
57f46e7c0d Fix printed string showed when file opening fails 2013-02-13 19:18:55 +00:00
Tiago Gomes
ab7f4c8113 Fix namespace name 2013-02-13 19:09:11 +00:00
Tiago Gomes
ef4ebb4d7f Use camel case for constants and enumerators. 
All capitals case should be reserved for macros and besides there is no big need to emphasize constness in general.
 2013-02-13 18:54:15 +00:00
Tiago Gomes
afd26ed9b4 Trivial 2013-02-13 15:25:55 +00:00
Tiago Gomes
bd70033c06 Disallow copy and assign for Var too 2013-02-13 14:42:24 +00:00
Tiago Gomes
2bc123d72c Update class, struct and enum bracket style 2013-02-13 14:26:47 +00:00
Tiago Gomes
e178c1af04 Change namespace name to be in Pascal case 2013-02-08 21:12:46 +00:00
Tiago Gomes
6a1a209ee3 Revert "Improve namespace names" 
This reverts commit 973df43fe0.

On a second thought, namespaces are close to classes in the sense that both encapsulate data, so they should both use Pascal case notation.
 2013-02-08 21:01:53 +00:00
Tiago Gomes
264ef7a067 Clean a bit LiftedWCNF class 2013-02-08 12:12:45 +00:00
Tiago Gomes
bff56c75ca Trivial 2013-02-08 01:11:18 +00:00
Tiago Gomes
98842dca74 Trivial 2013-02-08 00:56:42 +00:00
Tiago Gomes
c41b6d80b6 Trivial 2013-02-08 00:28:32 +00:00
Tiago Gomes
cd8a25162e Trivial 2013-02-08 00:22:51 +00:00
Tiago Gomes
206cf0a9c7 Trivial 2013-02-08 00:20:01 +00:00
Tiago Gomes
973df43fe0 Improve namespace names 2013-02-08 00:15:41 +00:00
Tiago Gomes
6f83ceb6f5 Put the code inside a horus namespace 2013-02-07 23:53:13 +00:00
Tiago Gomes
4267465f53 Trivial 2013-02-07 22:41:04 +00:00
Tiago Gomes
3738d0b2c6 Move some things around. No functional changes 2013-02-07 22:37:45 +00:00
Tiago Gomes
2992f9e3cf Trivial 2013-02-07 20:54:59 +00:00
Tiago Gomes
5c84a2f532 Improve includes 2013-02-07 20:09:10 +00:00
Tiago Gomes
544d0aa39e Improve header guards (again) 2013-02-07 17:50:33 +00:00
Tiago Gomes
bb7a530da3 Avoid importing the std namespace 2013-02-07 13:37:15 +00:00
Tiago Gomes
7b60e88545 Improve Header guards 2013-02-06 22:58:42 +00:00
Tiago Gomes
80452bf75d Small improvements 2013-02-06 00:29:29 +00:00
Tiago Gomes
42a5bc493a Move methods with more than two lines to outside of class definition 2013-02-06 00:29:03 +00:00
Tiago Gomes
0d9d59f5fe Trivial 2013-01-25 13:58:30 +00:00
Tiago Gomes
bef65dac57 Fix a compilation error with older versions of GCC 2013-01-25 13:47:20 +00:00
Tiago Gomes
9dfedafe98 PFL manual: small improvements 2013-01-25 13:45:35 +00:00
Tiago Gomes
5683258187 PFL manual: fix typo 2013-01-16 08:53:09 +00:00
Tiago Gomes
6cad8969c6 Put solver always as the first argument 2013-01-15 12:27:21 +00:00
Tiago Gomes
83ccb31665 PFL manual: rework the parameter learning section 2013-01-12 12:30:34 +00:00
Tiago Gomes
90614d3594 PFL manual: minor tweaks 2013-01-12 12:30:14 +00:00
Tiago Gomes
3ecc65b816 PFL manual: fix typo, is sprinkler not sprinker 2013-01-11 21:15:01 +00:00
Tiago Gomes
509491cd0f PFL manual: improve the way we present the solver options 2013-01-11 19:39:27 +00:00
Tiago Gomes
8c8e2b034f Improve a bit the learning examples 2013-01-11 00:16:56 +00:00
Tiago Gomes
8285b8e1e4 Cuttify\! 2013-01-10 23:38:46 +00:00
Tiago Gomes
8f9b11cc7c Comment set_em_solver so that hve becomes that default 2013-01-10 23:04:17 +00:00
Tiago Gomes
4aa4cb50b0 Switch solver order in examples 2013-01-10 23:02:34 +00:00