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812 Commits

Author SHA1 Message Date
Tiago Gomes
f6e3bb4481 don't assert when suming numbers with negative infinity 2012-04-13 23:12:12 +01:00
Tiago Gomes
24a5fe9c23 add typedef 2012-04-13 15:56:37 +01:00
Tiago Gomes
05ef8610f4 fix warning 2012-04-13 15:47:41 +01:00
Tiago Gomes
00faccd940 implement a printSolverParameters in ground solvers 2012-04-13 15:22:24 +01:00
Tiago Gomes
f3be68a552 add a way to print bool vars 2012-04-13 15:21:11 +01:00
Tiago Gomes
15c8f3abc6 ops 2012-04-12 18:46:21 +01:00
Tiago Gomes
5348c4a989 comment debug information in some prolog files 2012-04-12 18:35:29 +01:00
Vítor Santos Costa
5a8cc421d2 small pfl fixes. 2012-04-12 18:11:29 +01:00
Vítor Santos Costa
c5f42cd7eb more pfl changes. 2012-04-12 17:24:39 +01:00
Vítor Santos Costa
8c2dd1f847 fix bad call for parameters. 2012-04-12 17:17:21 +01:00
Vítor Santos Costa
28ce2da3dc Merge branch 'master' of https://github.com/tacgomes/yap6.3 2012-04-12 17:07:19 +01:00
Tiago Gomes
9def6c2b15 tempary hack to fix cbp and clean in benchs.sh 2012-04-12 00:42:55 +01:00
Tiago Gomes
564958ef8d improvements on benchmarkings 2012-04-11 23:48:59 +01:00
Tiago Gomes
03013960d3 refactor the city benchmarks and introduce set_solver/1 2012-04-11 19:15:52 +01:00
Tiago Gomes
f2fbbf29d8 rework the examples and erase the city network in the old format 2012-04-11 15:36:50 +01:00
Tiago Gomes
8697fcd2b4 refactorings 2012-04-10 20:43:08 +01:00
Tiago Gomes
78e86a6330 refactor ground solver interface 2012-04-10 15:00:18 +01:00
Tiago Gomes
46e6a10625 convert city dataset to new format 2012-04-10 12:56:14 +01:00
Tiago Gomes
b52dc99914 refactorings 2012-04-10 12:53:52 +01:00
Tiago Gomes
aa1b2e40ea some renamings 2012-04-10 11:51:56 +01:00
Tiago Gomes
6986e8c0d7 Improvements 
Factor nodes now contain a factor object instead of a pointer. Refactor the way .fg and .uai formats are readed.
 2012-04-09 15:40:51 +01:00
Tiago Gomes
f1d52c0389 add missing files 2012-04-05 23:04:27 +01:00
Tiago Gomes
d1b25f0864 renamings and delete bn_bp stuff 2012-04-05 23:00:48 +01:00
Tiago Gomes
b28ee8fb3a drop bayesian network representation 2012-04-05 20:08:54 +01:00
Tiago Gomes
abb0410d07 drop suport for Pearl belief propagation 2012-04-05 19:34:37 +01:00
Tiago Gomes
0d23591058 Add support to markov networks 2012-04-05 18:38:56 +01:00
Vítor Santos Costa
bc2364c5dc small fixes 2012-04-04 08:29:20 +01:00
Tiago Gomes
6c3add2ebd first steps in adapting horus ground solvers to pfl 2012-04-03 19:53:27 +01:00
Vítor Santos Costa
2bdec8f725 more PFL fixes. 2012-04-03 17:12:58 +01:00
Vítor Santos Costa
14d142aa10 new example. 2012-04-03 16:23:26 +01:00
Vítor Santos Costa
65e0c3b2a2 more PFL changes. 2012-04-03 16:22:40 +01:00
Vítor Santos Costa
6ccd458ea5 Merge branch 'master' of https://github.com/tacgomes/yap6.3 
Conflicts:
	packages/CLPBN/clpbn/bp.yap
	packages/CLPBN/clpbn/fove.yap
	packages/CLPBN/clpbn/horus.yap
 2012-04-03 15:07:22 +01:00
Vítor Santos Costa
44cb6abcb6 PFL support. 2012-04-03 15:01:35 +01:00
Vítor Santos Costa
e130c26c6d improve bdd support. 2012-04-03 15:01:14 +01:00
Vítor Santos Costa
3d216cf9db iextend bdd support. 2012-04-03 15:00:22 +01:00
Tiago Gomes
911b241ad6 fix align of logical variables 2012-04-03 11:58:21 +01:00
Tiago Gomes
fd8980642b another test 2012-04-01 00:23:03 +01:00
tgomes
c6128c51e8 this is a test 2012-03-31 23:59:05 +01:00
Tiago Gomes
e9cc1a8be2 remove unnecessary files 2012-03-31 23:44:08 +01:00
Tiago Gomes
313f9a036a yay, my first commit 2012-03-31 23:27:37 +01:00
Vítor Santos Costa
3563dcbf03 control for very large bdds. 2012-03-30 09:50:18 +01:00
tgomes
24b466db4e new version. 2012-03-29 12:24:29 +01:00
Vítor Santos Costa
0a9076bf4a bdd 2012-03-28 10:59:26 +01:00
Vítor Santos Costa
9ff1399482 new versions of packages. 2012-03-27 14:59:22 +01:00
Vítor Santos Costa
295cf24f5c extend functionality. 2012-03-27 14:57:43 +01:00
Vítor Santos Costa
cd45c64dcc allow optimisation and preserve ordering. 2012-03-27 14:57:12 +01:00
Vítor Santos Costa
52e5fdb6aa fix typo and export extra 2012-03-25 21:42:49 +01:00
Vítor Santos Costa
7d6b2435e0 fix typo and export extra 2012-03-25 21:42:39 +01:00
Vítor Santos Costa
a38177207d use safer method 2012-03-25 21:41:03 +01:00
Vítor Santos Costa
b6d5b79789 force parent unification when binding two variables with same key 2012-03-25 21:40:29 +01:00
Vítor Santos Costa
7d6461a527 fix order. 2012-03-23 22:26:31 +00:00
Vítor Santos Costa
07335ce047 clp(bn) support 2012-03-22 23:24:09 +00:00
Vítor Santos Costa
6b1574757e fix dist usage. 2012-03-22 22:32:50 +00:00
Vítor Santos Costa
f5f13541c6 old new syntax 2012-03-22 22:23:20 +00:00
Vítor Santos Costa
4c1602b74b old syntax example. 2012-03-22 22:22:16 +00:00
Vítor Santos Costa
6ad2c9b3a9 experimental BDD interface package. 2012-03-22 21:36:44 +00:00
Vítor Santos Costa
a338b95d3f add more support for FOVE. 2012-03-22 19:10:15 +00:00
Vítor Santos Costa
7d4f83ca40 improve examples. 2012-03-22 19:09:31 +00:00
Vítor Santos Costa
172f59cee5 ifix interface to clp(bn) machinery. 2012-03-22 19:08:36 +00:00
Vitor Santos Costa
c85e76f20f new fove version. 2012-03-22 11:40:24 +00:00
Vitor Santos Costa
6191dd210b new version 2012-03-22 11:35:54 +00:00
Vitor Santos Costa
21d317b223 new version of bp 2012-03-22 11:33:24 +00:00
Vitor Santos Costa
6e36498cac new version. 2012-03-22 11:29:46 +00:00
Vítor Santos Costa
8ba0bee7ab updates to packages. 2012-02-17 11:31:55 +00:00
Vítor Santos Costa
48cbed8b20 update to latest release. 2012-02-14 18:58:12 +00:00
Vítor Santos Costa
8c556f21ba include XMLPL package. 2012-02-14 12:41:12 +00:00
Vitor Santos Costa
247aa54046 back to using YAP writer. 2012-02-13 23:07:31 +00:00
Vítor Santos Costa
fc4edc3ad1 update version. 2012-02-13 19:30:00 +00:00
Vítor Santos Costa
70b41fbdb7 iupdate packages. 2012-02-13 11:26:23 +00:00
Vítor Santos Costa
dd762fe664 new versions. 2012-02-13 10:35:05 +00:00
Vítor Santos Costa
32d953809e update packages. 2012-02-13 09:43:50 +00:00
Vítor Santos Costa
64319f622f better SWI support. 2012-02-13 09:41:22 +00:00
Vítor Santos Costa
ea18699602 JPL support patches. 2012-02-12 12:28:37 +00:00
Vítor Santos Costa
73b1a8d6f8 change R configuration. 2012-02-06 11:01:10 +00:00
Vítor Santos Costa
e6fb330f58 fix warnings. 2012-02-03 20:55:35 +00:00
Vítor Santos Costa
ab33cacf7b LAM MPI interface support. 2012-02-02 23:25:31 +00:00
Vítor Santos Costa
4e6cc28cd3 lam support. 2012-02-02 09:58:05 +00:00
Vítor Santos Costa
dddf5bce80 update 2012-02-01 21:01:24 +00:00
Vítor Santos Costa
c4ee7ee0c3 Merge branch 'master' of ssh://git.dcc.fc.up.pt/yap-6.3 
Conflicts:
	.gitmodules
	configure
	packages/real
 2012-02-01 20:57:42 +00:00
Vítor Santos Costa
4c6164034e real stuff. 2012-02-01 20:50:57 +00:00
Vítor Santos Costa
7a99e4f974 fix openmpi/lam detection under Linux/UBUNTU 
fix -I in R interface.
 2012-02-01 10:26:04 +00:00
Vítor Santos Costa
d106c08f8c :make sure we get rid of YapR 2012-02-01 08:58:20 +00:00
Vítor Santos Costa
7fc23ea139 update latest r..eal 2012-02-01 08:49:06 +00:00
Vítor Santos Costa
c6a8f68e67 update to recent real. 2012-01-31 15:15:07 +00:00
Vítor Santos Costa
e4bfd98830 use real package shared with swi. 2012-01-31 15:11:39 +00:00
Vítor Santos Costa
ed0d3f6cae Latest ProbLog 2012-01-11 14:44:59 +00:00
Vítor Santos Costa
2e2e2deb91 new version 2012-01-10 18:50:24 +00:00
Vítor Santos Costa
a25c97c295 fove initial skeleton.w 2012-01-10 17:01:06 +00:00
Vitor Santos Costa
3f97a3f24a new version 2012-01-09 23:31:30 +00:00
Vítor Santos Costa
bf12f320fe fix CPT handling in aggregates. 2011-12-27 22:08:21 +00:00
Vítor Santos Costa
8f3eabef1d support parfactors, first step. 2011-12-27 22:07:42 +00:00
Vítor Santos Costa
d01eec1dbe iupdate changes. 2011-12-22 11:43:30 +00:00
Vítor Santos Costa
7df0fd90f5 Changes by Tiago 2011-12-12 15:30:24 +00:00
Vítor Santos Costa
33bf0bc0f5 new release from Tiago 2011-12-12 15:29:51 +00:00
Vítor Santos Costa
03391e3feb New Version From Tiago 2011-12-10 23:12:10 +00:00
Vítor Santos Costa
dbcb6e530c New Version From Tiago 2011-12-10 22:58:43 +00:00
Vítor Santos Costa
1a4e31e7a0 fix MKINDEX call 2011-12-02 23:09:04 +00:00
Vítor Santos Costa
79d1bf5eec Merge branch 'master' of ssh://yap.git.sourceforge.net/gitroot/yap/yap-6.3 
Conflicts:
	OPTYap/opt.config.h
	OPTYap/opt.structs.h
 2011-11-30 13:24:12 +00:00
Vítor Santos Costa
fec7019a79 fix some warnings 
improve thread support.
 2011-11-30 13:05:21 +00:00
Vítor Santos Costa
2f6ec5ff59 improve learning for CLP(BN). 2011-11-30 13:04:13 +00:00
Vítor Santos Costa
6c1cf7ea39 update to OSX support. 2011-11-18 22:24:46 +00:00
Vítor Santos Costa
e33712403f fix prism compilation and PRISM overflow handling. 2011-11-18 18:33:22 +00:00
Vítor Santos Costa
ae29efec0c iupdate version. 2011-11-18 16:26:41 +00:00
Vítor Santos Costa
0334632e6e improvements to YapR. 2011-11-17 12:58:22 +00:00
Vitor Santos Costa
fedf37ee35 update yapr 2011-11-15 12:59:00 +00:00
Vítor Santos Costa
946887d3b8 update ! 2011-11-15 12:46:03 +00:00
Vítor Santos Costa
df949efdb3 fix god knows what. 2011-11-15 12:40:55 +00:00
U-WIN7\Vitor
a2917e4e9e support R in WIN32. 2011-11-15 04:37:21 -08:00
Vítor Santos Costa
79bcde0869 fix variable that belongs to Makefile.in 2011-11-15 11:18:16 +00:00
Vítor Santos Costa
b7d9e63c17 ifix clib Makefile.in 2011-11-15 11:17:00 +00:00
Vitor Santos Costa
71bedb75f2 fix configuration script to better recognsie R. 2011-11-15 10:22:03 +00:00
Vítor Santos Costa
e865248dce prism logical probabilistic system. 2011-11-10 12:24:47 +00:00
Vítor Santos Costa
3dbae0cb94 Merge branch 'master' of ssh://yap.git.sourceforge.net/gitroot/yap/yap-6.3 2011-11-04 02:48:28 +00:00
Vítor Santos Costa
0141113583 fix bug. 2011-11-03 07:53:21 +09:00
fabrizio
016cd42226 no copy of learning algorithms subdirectories 2011-10-31 14:26:18 +01:00
Fabrizio Riguzzi
be449b3aef updated cplint 2011-10-22 16:33:04 +02:00
U-WIN-U2045GN0RNQ\Vítor Santos Costa
d173af8d2d fix 2011-10-21 19:14:04 +01:00
Vitor Santos Costa
e56e1cbacb small fixes 2011-09-24 21:39:37 +01:00
Vitor Santos Costa
b2dcc47f9c fix evidence problems. 2011-09-24 21:38:59 +01:00
Vitor Santos Costa
dd9aa08eec fix aleph-params install 2011-09-24 21:37:50 +01:00
Vitor Santos Costa
ff84eaf782 delete_file changed in 6.3. 2011-09-20 14:50:24 +01:00
Vítor Santos Costa
5baf42320b recompute tables when commit. 2011-09-20 09:55:09 +01:00
Vítor Santos Costa
bfc1def1d5 imake sure mutable is available. 2011-09-20 09:54:30 +01:00
Vítor Santos Costa
4855c3460a improve memory usage when storing piointers to evidence facts. 2011-09-15 15:49:57 +01:00
Vítor Santos Costa
cdd33b8c1a new CPLint and ProbLog versions. 2011-09-15 15:49:06 +01:00
Vitor Santos Costa
04f0a4bb73 fix Makefile.in for minisat. 2011-09-06 21:18:30 +02:00
Vitor Santos Costa
01c80d77e0 update latest releaase of ProbLog 2011-09-05 03:07:15 +02:00
Vitor Santos Costa
86c1842cff upgrade to packages and to package docs. 2011-09-05 02:28:34 +02:00
Vitor Santos Costa
fda246f6fc upgradae packages. 2011-09-05 01:11:49 +02:00
Vitor Santos Costa
d38d54b67a small fix to Dialects. 2011-09-05 00:01:41 +02:00
Vitor Santos Costa
9cfd4d8d8b move package/PLStream to os 
modify Makefiles accordingly
define __unix__ on Unix like clones (OSX, AIX, etc).
 2011-09-04 19:42:33 +02:00
Vitor Santos Costa
89023264a3 update branch 2011-09-04 19:32:21 +02:00
Vitor Santos Costa
df45128c8a new version of clib 2011-09-04 19:31:49 +02:00
Vitor Santos Costa
284ac49217 fix wide atom writing. 2011-09-02 23:22:35 +01:00
Vitor Santos Costa
d21888abc9 adjust submodules 2011-08-31 14:11:01 -07:00
Vitor Santos Costa
e19133e362 Merge branch 'master' of ssh://yap.git.sourceforge.net/gitroot/yap/yap-6.3 2011-08-22 15:46:52 -03:00
Vitor Santos Costa
6c284faf8b make sure we do a full reset after Scleanup. 2011-08-22 15:45:49 -03:00
Vitor Santos Costa
811606059e try encoding even if . is not in string 2011-08-22 15:45:16 -03:00
U-WIN-U2045GN0RNQ\Vítor Santos Costa
b6aca9463d Merge branch 'master' of ssh://yap.git.sourceforge.net/gitroot/yap/yap-6.3 2011-08-18 22:35:13 +01:00
U-WIN-U2045GN0RNQ\Vítor Santos Costa
5fa4da2e22 fix win directory access in YAP. 2011-08-18 22:33:49 +01:00
Vitor Santos Costa
2256c3bf8b add timezone flag 2011-08-16 13:31:19 +00:00
Vitor Santos Costa
23be6ccdfc fix wide atom handling. 2011-08-12 11:52:47 -03:00
Vitor Santos Costa
b9effea2e9 fix changes 2011-08-09 08:12:52 -03:00
Vitor Santos Costa
c871761c11 more qly stuff. 2011-08-03 08:23:00 +01:00
Vitor Santos Costa
545a3a2b03 writing hook for opaque terms. 2011-07-30 00:06:52 +01:00
Vitor Santos Costa
0e964c7278 include SWI patch. 2011-07-26 21:05:53 +01:00
Vitor Santos Costa
ffae487cf2 fix path support in WINDOWS. 2011-07-26 18:42:13 +01:00
Vitor Santos Costa
e145910234 windows path support. 2011-07-26 18:41:45 +01:00
U-WIN-U2045GN0RNQ\Vítor Santos Costa
5437984815 Merge branch 'master' of /cygdrive/z/vitor/Yap/yap-6.3 2011-07-26 17:07:10 +01:00
Vitor Santos Costa
69f1bedf47 copy error routines from SWI. That was easy. 2011-07-25 23:52:05 +01:00
Vitor Santos Costa
f73d7ef5f6 fixes for WIN32 compilation. 2011-07-25 23:51:45 +01:00
U-WIN-U2045GN0RNQ\Vítor Santos Costa
4fe1833ece Merge branch 'master' of /cygdrive/z/vitor/Yap/yap-6.3 2011-07-25 17:09:43 +01:00
U-WIN-U2045GN0RNQ\Vítor Santos Costa
840e287cda mode changes 2011-07-25 17:09:28 +01:00
Vitor Santos Costa
69e5fed10f new version of belief propagation solver. 2011-07-22 21:33:30 +01:00
Vitor Santos Costa
a16a7d5b1c fix calling of Write and Read for new SWI style interface. 2011-07-22 15:49:40 +01:00
Vitor Santos Costa
eea7f83e09 fix module stuff. 2011-07-22 14:50:32 +01:00
Vitor Santos Costa
08217b825b update swi packages. 2011-07-22 14:41:17 +01:00
Vitor Santos Costa
c78aa3cf1d fix user-c spying. 2011-07-22 14:10:55 +01:00
Vitor Santos Costa
e4a775925b fix handling of YAP_Blob terms. 2011-07-22 04:09:14 -07:00
Vitor Santos Costa
6fdf6b49f6 fix computation of cut register for either (yapor). 2011-07-21 14:39:57 +01:00
Vitor Santos Costa
de60807724 cleanup patch 2011-07-14 09:40:15 +01:00
Ricardo Rocha
22d8e33a5f fix cut support for or-parallelism 2011-07-13 17:36:26 +01:00
Vitor Santos Costa
45e5e3b983 work if ipackages are missing and some cleanups. 2011-07-13 15:31:22 +01:00
ubu32
2a51403518 fix restore of streams. 2011-07-11 21:15:15 -07:00
ubu32
f968a745e8 fix Scurin in mt 2011-07-11 07:06:20 -07:00
ubu32
2b213963dd use Scurin by default in read/1. 2011-07-10 04:50:55 -07:00
ubu32
04a6911b9f fix warnings. 2011-07-09 09:15:52 -07:00
ubu32
87b99f4d54 update pldoc. 2011-07-09 08:23:12 -07:00
Vitor Santos Costa
1130a3536d fix ProbLog error. 2011-07-04 22:36:57 +01:00
Vitor Santos Costa
9727f3c71c fix warning messages. 2011-07-04 22:36:34 +01:00
Vitor Santos Costa
21050891ee city example. 2011-07-02 09:49:12 +01:00
Vitor Santos Costa
be345a0387 update to recent ProbLog. 2011-06-26 23:13:43 +01:00
Vitor Santos Costa
249010bd90 add SWI compatible file_name_variables flag. 2011-06-21 22:33:10 +01:00
Vítor Santos Costa
53f76eb198 fix Makefile 2011-06-14 11:13:32 +01:00
Vítor Santos Costa
9549277295 fix Makefilew 2011-06-14 09:41:20 +01:00
Vítor Santos Costa
866d2130af disable make_index for now. 2011-06-14 09:39:19 +01:00
Vitor Santos Costa
b3a2f8efb2 new package (pldoc) and updates to several other packages. 2011-06-14 09:17:55 +01:00
Vitor Santos Costa
26c72dcfb1 include ww_browser 2011-06-13 01:57:15 +01:00
Vitor Santos Costa
f10e25b00d update packages. 2011-06-13 01:45:59 +01:00
Vitor Santos Costa
456adc6a4a pldoc seems to be working in YAP. 2011-06-13 01:45:29 +01:00
Vitor Santos Costa
9eabaa580c support for documentation in packages. 2011-06-12 22:26:04 +01:00
Vitor Santos Costa
f04a153e42 flag unavailable before gcc-4.2 2011-06-11 23:07:02 +01:00
U-WIN-ENP104VVO3U\Vítor Santos Costa
48284cfb44 windows console fixes 2011-06-09 17:55:27 +01:00
U-WIN-ENP104VVO3U\Vítor Santos Costa
a0748c7c10 windows interface. 2011-06-06 19:03:20 +01:00
U-WIN-ENP104VVO3U\Vítor Santos Costa
d685b8891f fix compilation flag. 2011-06-06 12:29:28 +01:00
U-WIN-ENP104VVO3U\Vítor Santos Costa
eb700c647d fix lost buffer 2011-06-06 12:29:13 +01:00
Vítor Santos Costa
b1a3b925ae handle variable destroyed by garbage collector. 2011-06-03 12:54:09 +01:00
Vítor Santos Costa
56d71e55b4 remove unecesary files. 2011-06-03 12:26:10 +01:00
Vitor Santos Costa
1962a0507f Merge branch 'master' of ssh://yap.git.sourceforge.net/gitroot/yap/yap-6.3 2011-06-01 14:39:43 +01:00
Vitor Santos Costa
e9171547b9 implementation of bayes ball. 2011-05-27 21:34:55 +01:00
Vítor Santos Costa
791106aa05 these two now include SWI-Stream in Yap.h, so they need PL_KERNEL defined before Yap.h. 2011-05-27 11:49:42 +01:00
Joao
f658a99dad fix C/scanner.c. change some misc/LOCALS initializations. 2011-05-26 15:02:00 +01:00
Joao
98e35b16e8 Merge branch 'master' of ssh://yap.git.sourceforge.net/gitroot/yap/yap-6.3 2011-05-25 16:41:39 +01:00
Joao
971ad94311 moved several global variables to misc/GLOBALS 2011-05-25 16:40:36 +01:00
Vítor Santos Costa
14bdc262df export TermToStream 2011-05-25 13:10:39 +01:00
Vitor Santos Costa
b3bd547f55 vel -> ve 2011-05-21 00:27:25 +01:00
Vitor Santos Costa
27dbe24b9e just link if variables have evidence, we can discard other unused variables. 2011-05-21 00:19:53 +01:00
Vitor Santos Costa
adcc2797e1 make sure query variables are accessible from top-level. 2011-05-21 00:15:20 +01:00
Vitor Santos Costa
55e2e6fe3a small fixes 2011-05-20 23:56:12 +01:00
Vitor Santos Costa
6d4d2b5830 fix Makefile for bp 2011-05-19 09:23:32 +01:00