diogo/yap-6.3
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407 Commits

Author SHA1 Message Date
Tiago Gomes
5e1547ba78 add missing method to TinySet 2012-11-06 15:15:55 +00:00
Tiago Gomes
ab334f82b2 fix weighted model counting in atom counting nodes 2012-11-06 14:16:04 +00:00
Tiago Gomes
4518a3db5d support smoothing on atom counting nodes (beta) 2012-11-04 18:02:40 +00:00
Tiago Gomes
b8cef8798a fix warning produced by new version of gcc 2012-11-01 22:54:14 +00:00
Tiago Gomes
a1d0deb638 support model counting on atom couting nodes - still untested 2012-11-01 22:34:28 +00:00
Tiago Gomes
d4912ea219 some reorders 2012-11-01 13:56:12 +00:00
Tiago Gomes
bfa9648067 clean up 2012-10-31 23:58:07 +00:00
Tiago Gomes
6877be897e first stab for atom counting 2012-10-31 23:43:39 +00:00
Tiago Gomes
e762d6be22 tweak colors 2012-10-30 16:00:20 +00:00
Tiago Gomes
77ef7b87cd support smoothing in inclusion-exclusion nodes 2012-10-30 15:48:19 +00:00
Tiago Gomes
b31a047635 refactor exportToGraphViz 2012-10-30 14:31:52 +00:00
Tiago Gomes
a75799b34f small improvements 2012-10-30 12:41:00 +00:00
Tiago Gomes
864f764391 support model counting in inc-exc nodes 2012-10-30 01:51:10 +00:00
Tiago Gomes
8b77b93a3b add support for inclusion-exclusion 2012-10-30 00:21:10 +00:00
Tiago Gomes
b6df8a66b1 add assignement operator to ConstraintTree 2012-10-30 00:15:40 +00:00
Tiago Gomes
d07ea73050 add projectedCopy 2012-10-29 21:37:58 +00:00
Tiago Gomes
324ea1a96c make independent partial ground suck less 2012-10-29 20:49:21 +00:00
Tiago Gomes
c2b1434969 show weights in dot file and add support for smoothing set-and nodes 2012-10-29 15:39:56 +00:00
Tiago Gomes
fbc44ba17d improments in exportToGraphViz 2012-10-29 13:49:11 +00:00
Tiago Gomes
d074ca9a8f add initial independent partial grounding support 2012-10-27 00:13:11 +01:00
Tiago Gomes
68ef63207f initial support for weighted model countign 2012-10-25 12:22:52 +01:00
Tiago Gomes
eac6b954a8 add inital smoothing of the circuit 2012-10-24 21:22:49 +01:00
Tiago Gomes
0cfc64d068 update TODO 2012-10-24 16:24:49 +01:00
Tiago Gomes
a8926fe38b inital code for lifted knowledge compilation 2012-10-22 23:01:13 +01:00
Vítor Santos Costa
b24922fd38 fix bdd with em 2012-10-04 00:15:18 +01:00
Vitor Santos Costa
4e43aff605 Merge branch 'master' of ssh://yap.git.sourceforge.net/gitroot/yap/yap-6.3 2012-10-03 17:17:24 +01:00
Vitor Santos Costa
93f13c9c8d Merge branch 'master' of https://github.com/tacgomes/yap6.3 2012-10-03 17:15:49 +01:00
Vítor Santos Costa
ab14365a30 try to make bdds work with EM. 2012-10-03 10:23:27 +01:00
Vitor Santos Costa
01e1a14160 improve indirect evidence handling in PFL queries (obs from Andrea) 2012-10-03 09:50:50 +01:00
Vítor Santos Costa
e6fb32d9ca fix problem with conditional_probability/3 and evidence (obs from Andrea Sterbini). 2012-10-02 14:26:42 +01:00
Vítor Santos Costa
85e9da1332 hve with em works now. 2012-10-02 08:49:16 +01:00
Tiago Gomes
559b3e3b54 watch out for division by 0 in message calculation for BP 2012-09-30 22:04:44 +01:00
Vítor Santos Costa
793907f710 more EM stuff 2012-09-29 11:50:00 +01:00
Tiago Gomes
fec0bd44b4 Merge branch 'master' of ssh://yap.git.sourceforge.net/gitroot/yap/yap-6.3 2012-09-28 22:42:08 +01:00
Vítor Santos Costa
83c5c7e7af more PFL support. 2012-09-26 00:04:58 +01:00
Tiago Gomes
265766277f Merge branch 'master' of ssh://yap.git.sourceforge.net/gitroot/yap/yap-6.3 2012-09-24 22:23:48 +01:00
Vítor Santos Costa
83418f8f27 bdd and pfl integration work (partial patch). 2012-09-24 14:36:30 +01:00
Vítor Santos Costa
ac863833ff PFL machinery 2012-09-23 13:25:15 +01:00
Vítor Santos Costa
309dfaa813 aggregates in PFL: exa,ple 2012-09-23 13:24:49 +01:00
Vítor Santos Costa
34dc03d43b new version of ve 2012-09-23 13:23:53 +01:00
Vítor Santos Costa
2603f18a10 support factors 2012-09-23 13:23:37 +01:00
Vítor Santos Costa
d73b2ac673 convert keys to numbers. 2012-09-23 13:23:05 +01:00
Tiago Gomes
10b15f606a fix counting bp calculation of joint distribution 2012-09-18 17:24:22 +01:00
Tiago Gomes
701911ef09 forgot this 2012-09-11 18:48:54 +01:00
Tiago Gomes
febb17d753 fix factor joint 2012-09-11 18:48:16 +01:00
Tiago Gomes
86b57e961e fix memory leak 2012-09-11 18:40:41 +01:00
Costa Vitor
f4e965c02f more small fixes. 2012-08-29 16:36:46 -05:00
Costa Vitor
62ab5b3dcb new ve 2012-08-28 20:21:14 -05:00
Vítor Santos Costa
05d3266671 fix lib64 issues 2012-08-22 10:07:33 -05:00
Costa Vitor
a76f4f34d5 make EM work with PFL and BP. 2012-08-15 16:01:45 -05:00
Vítor Santos Costa
7e8cac9fb1 a step forward. 2012-08-13 09:23:36 -05:00
Costa Vitor
4756948967 fix processing of pfl ground networks. 2012-08-08 22:16:37 -05:00
Vítor Santos Costa
2b2cedc2b6 remove some comments and improve em interface. 2012-08-07 21:53:10 -05:00
Costa Vitor
98f68edd34 PFL files should have the PFL suffiv 2012-08-07 18:35:44 -05:00
Costa Vitor
e2fa3a3b8a fix call to ground solvers, both using clpbn style and horus style. 2012-08-07 18:33:51 -05:00
Vítor Santos Costa
bc8c9a423a Merge branch 'master' of ssh://yap.git.sourceforge.net/gitroot/yap/yap-6.3 
Conflicts:
	packages/jpl
 2012-07-07 09:54:27 -05:00
Vítor Santos Costa
1e1d49e112 allow installing examples by defult. 2012-07-07 09:43:07 -05:00
Vitor Santos Costa
c67edd877a learning is debugging 2012-07-03 19:48:13 +01:00
Tiago Gomes
4af5a90b8b re-enable all elimination heuristics 2012-07-02 22:53:44 +01:00
Tiago Gomes
7a3d39551b improve the way we compute hashs for counting bp 2012-06-30 19:25:29 +01:00
Tiago Gomes
5e2d9acc4f update comment 2012-06-26 19:44:27 +01:00
Vitor Santos Costa
87e0b67e76 start with pfl learning. 2012-06-22 19:00:12 +01:00
Vitor Santos Costa
5fe052a3ef Merge branch 'master' of https://github.com/tacgomes/yap6.3 2012-06-22 14:51:58 +01:00
Tiago Gomes
3e56cf5e42 update burglary-alarm 2012-06-19 21:19:02 +01:00
Tiago Gomes
25e87a5ddc whitespace fixes 2012-06-19 15:30:55 +01:00
Tiago Gomes
57edd6adb9 minor improvements 2012-06-19 15:29:09 +01:00
Tiago Gomes
ee5b8e693a re-activate bayes ball 2012-06-19 15:10:57 +01:00
Tiago Gomes
9a8464d0f0 some renamings 2012-06-19 14:32:12 +01:00
Tiago Gomes
942bc8041e update burglary-alarm 2012-06-18 23:10:18 +01:00
Tiago Gomes
63739c6e31 minor updates 2012-06-18 23:08:37 +01:00
Tiago Gomes
b16b0b6a3f add a README file 2012-06-18 21:38:40 +01:00
Tiago Gomes
b4d2e7af20 remove unecessary call 2012-06-18 14:40:44 +01:00
Tiago Gomes
05b3daf5bb trivial fix 2012-06-14 12:19:51 +01:00
Tiago Gomes
384c108e62 fix joint calculation with lifted bp 2012-06-14 11:57:00 +01:00
Tiago Gomes
0e83a75b60 improve calculation of joint dist in counting bp 2012-06-13 12:47:41 +01:00
Tiago Gomes
b43e3316b3 forgot destructor 2012-06-13 12:17:49 +01:00
Tiago Gomes
89725dffbb rename some enums 2012-06-12 21:27:17 +01:00
Tiago Gomes
af11dbb445 reorder entries in the Makefile and drop some objects not required to build hcli 2012-06-12 16:55:32 +01:00
Tiago Gomes
d4f63b3942 drop Solver suffix and rename some files and classes 2012-06-12 16:29:57 +01:00
Vitor Santos Costa
f6de18cb09 6.2 fix to load_foreign atom. 2012-06-11 22:11:30 +01:00
Tiago Gomes
919116763f add a run all tests script 2012-06-08 14:11:54 +01:00
Tiago Gomes
4cc869a164 update scripts 2012-06-08 14:11:11 +01:00
Tiago Gomes
f8e714dcc3 add social domain benchmark with evidence 2012-06-08 14:08:14 +01:00
Tiago Gomes
51c279d24c increase the cost of the grounding operator 2012-06-08 13:35:00 +01:00
Tiago Gomes
5785260644 fix warning 2012-06-06 15:04:28 +01:00
Tiago Gomes
568bb27a66 forgot this 2012-06-05 15:33:24 +01:00
Tiago Gomes
2cf6a2a33d add benchmark tests for lbp 2012-06-05 15:23:41 +01:00
Vitor Santos Costa
3669cb894f Merge branch 'master' of https://github.com/tacgomes/yap6.3 
Conflicts:
	packages/CLPBN/clpbn/horus.yap
 2012-06-04 16:29:56 +01:00
Tiago Gomes
eec4b1452b print all lifted bp flags 2012-06-01 19:31:07 +01:00
Tiago Gomes
8fa8fff9f1 minor improvements 2012-06-01 19:29:57 +01:00
Tiago Gomes
25ccfa2f54 only allow joint dists on cliques 2012-06-01 19:29:23 +01:00
Tiago Gomes
4708685ed4 fix bug in Factor::contains 2012-06-01 14:03:39 +01:00
Vitor Santos Costa
71a62307f4 CLP(BN) stuff. 2012-06-01 13:17:39 +01:00
Tiago Gomes
ecde9649a8 fix header guard 2012-06-01 12:35:44 +01:00
Tiago Gomes
b5369db214 use only solveQuery 2012-05-31 23:06:53 +01:00
Tiago Gomes
f91e543d9d workaround c++ bad design: don't allow creating a factor graph from some pointer 2012-05-31 22:42:38 +01:00
Tiago Gomes
3f0f41c8a9 cleanup 2012-05-31 21:24:40 +01:00
Tiago Gomes
e11ed1a226 forgot these two 2012-05-31 21:24:15 +01:00
Tiago Gomes
22d8876d33 add support to (real) lifted belief propagation 2012-05-31 21:12:46 +01:00
Tiago Gomes
22780c4559 handle empty vectors in TinySet 2012-05-31 14:57:53 +01:00