Tiago Gomes
|
56475cacbc
|
revamp debugging plataform
|
2012-04-29 20:07:09 +01:00 |
|
Tiago Gomes
|
d86e2c8386
|
don't raise counting log vars before multiplication
|
2012-04-28 01:10:04 +01:00 |
|
Tiago Gomes
|
1173b4c25b
|
when expanding a counting formula, check if the expanded log vars are still counting log vars
|
2012-04-28 01:01:23 +01:00 |
|
Tiago Gomes
|
52f4aa0340
|
sort the parfactors by their parameters when printing
|
2012-04-27 19:10:22 +01:00 |
|
Tiago Gomes
|
20fc2c8dd1
|
add debug information to variable elimination
|
2012-04-27 14:48:48 +01:00 |
|
Tiago Gomes
|
9e1a649262
|
raising the paramaters to some power should happen after summing out, not before
|
2012-04-27 14:47:30 +01:00 |
|
Tiago Gomes
|
7599ccd5a1
|
don't print the paramaters if they are more than 32
|
2012-04-27 01:19:28 +01:00 |
|
Tiago Gomes
|
af063dcda8
|
be more precise when calculating the cost of grounding a log var in a formula
|
2012-04-27 01:18:54 +01:00 |
|
Tiago Gomes
|
995a11be83
|
improvements in the way we align logical variables
|
2012-04-26 18:00:06 +01:00 |
|
Tiago Gomes
|
cc09e77707
|
remove unnecessary variable
|
2012-04-26 00:58:06 +01:00 |
|
Tiago Gomes
|
689244a0d8
|
improve cbp by supporting factors connected to a single var two or more times
|
2012-04-26 00:54:06 +01:00 |
|
Tiago Gomes
|
ad24a360ce
|
Add a way to summout a dimension given a index instead of a variable id.
This is required for counting belief propagation.
|
2012-04-25 22:59:01 +01:00 |
|
Tiago Gomes
|
fc362fe123
|
reorder the parameters instead of reordering variables
|
2012-04-23 22:57:04 +01:00 |
|
Tiago Gomes
|
0ebd6d6e06
|
improve constructor of VarNode
|
2012-04-23 22:40:36 +01:00 |
|
Tiago Gomes
|
3397f694fe
|
sort the variable ids when printing all posterioris
|
2012-04-23 22:12:04 +01:00 |
|
Vitor Santos Costa
|
040c1c7fa7
|
more ddnnf stuff
|
2012-04-23 07:13:01 -05:00 |
|
Tiago Gomes
|
d90fcd532b
|
minor update
|
2012-04-21 17:21:54 +01:00 |
|
Tiago Gomes
|
8c689665a0
|
support setting flags in horus cli and fix a bug when ordering the variables
|
2012-04-21 17:14:19 +01:00 |
|
Vitor Santos Costa
|
220f7e6efc
|
support mtbdds.
|
2012-04-20 16:42:59 -05:00 |
|
Tiago Gomes
|
085ebe1e96
|
check for overflows when performing expansion
case the factor size after expansion be bigger than an unsigned integer, abort the program
|
2012-04-20 17:16:10 +01:00 |
|
Tiago Gomes
|
0ffa409a80
|
fix a bug when expanding potential
|
2012-04-20 14:50:14 +01:00 |
|
Tiago Gomes
|
09697b8461
|
heuristic to improve results with fove
|
2012-04-19 18:37:15 +01:00 |
|
Tiago Gomes
|
2b7da4bc23
|
refactor the way we calculate the grounding cost
|
2012-04-19 17:59:45 +01:00 |
|
Tiago Gomes
|
661ce08961
|
check if the factor is not zero when choosing the elimination order
|
2012-04-19 12:08:27 +01:00 |
|
Tiago Gomes
|
cd1e157019
|
sort the colors in the signature receveied from a factor (add std namespace)
|
2012-04-18 19:29:43 +01:00 |
|
Tiago Gomes
|
7c100c96bc
|
sort the colors in the signature receveied from a factor
|
2012-04-18 19:29:11 +01:00 |
|
Tiago Gomes
|
862e90a36b
|
fix bug in joining constraint trees
|
2012-04-18 18:14:15 +01:00 |
|
Tiago Gomes
|
61ee95d92a
|
use logarithms to calculate the cost of each fove operator
|
2012-04-18 16:40:12 +01:00 |
|
Tiago Gomes
|
406276b62b
|
add missing scripts
|
2012-04-18 13:53:34 +01:00 |
|
Tiago Gomes
|
a7f57bea99
|
several optimizations on ConstraintTree
|
2012-04-18 03:05:01 +01:00 |
|
Tiago Gomes
|
cd720497f8
|
update groups when shattering
|
2012-04-18 03:04:06 +01:00 |
|
Tiago Gomes
|
bb5d02dbc0
|
minor updates
|
2012-04-18 03:03:29 +01:00 |
|
Tiago Gomes
|
dacf6b4e57
|
update examples
|
2012-04-18 02:57:24 +01:00 |
|
Tiago Gomes
|
d22b5a97fd
|
add missing scripts
|
2012-04-18 02:52:31 +01:00 |
|
Tiago Gomes
|
b7e9245f26
|
refactor and add more benchmarks scripts
|
2012-04-18 02:49:33 +01:00 |
|
Tiago Gomes
|
d8e757f9ab
|
improvements in the way factorials are computed
|
2012-04-18 02:46:38 +01:00 |
|
Tiago Gomes
|
cd8714460e
|
add a way of calculate factorials of large numbers
|
2012-04-17 20:24:40 +01:00 |
|
Tiago Gomes
|
f02d0fb798
|
add more api to sorted vector implementation
|
2012-04-17 19:02:56 +01:00 |
|
Tiago Gomes
|
5e88510a7d
|
use convenience function
|
2012-04-16 21:48:13 +01:00 |
|
Tiago Gomes
|
6ab5a4668b
|
change align of some functions
|
2012-04-16 21:47:06 +01:00 |
|
Tiago Gomes
|
dd0ae564ef
|
adapt to changes in CFactorGraph
|
2012-04-16 21:45:52 +01:00 |
|
Tiago Gomes
|
779f4ea2ce
|
fix debuging information and s/ds/range
|
2012-04-16 21:44:04 +01:00 |
|
Tiago Gomes
|
66353e67ec
|
some refactorings
|
2012-04-16 21:42:14 +01:00 |
|
Tiago Gomes
|
0d5888e238
|
assign evidence to the pruned factor graph
|
2012-04-16 21:40:28 +01:00 |
|
Tiago Gomes
|
b27500e93f
|
add nrVarNodes and nrFacNodes
|
2012-04-16 19:29:55 +01:00 |
|
Tiago Gomes
|
6f7d2af718
|
add another sorted vector implementation
|
2012-04-15 21:51:12 +01:00 |
|
Tiago Gomes
|
c32ad3de0a
|
use a sorted vector to store the node childs
|
2012-04-15 21:44:27 +01:00 |
|
Tiago Gomes
|
5e7b660f44
|
use iterators instead off indices
|
2012-04-15 03:19:15 +01:00 |
|
Tiago Gomes
|
62fedf014b
|
workaround garbage collector error
|
2012-04-14 18:00:12 +01:00 |
|
Tiago Gomes
|
f1d2889eaa
|
fix warning about uninitialized var
|
2012-04-14 17:59:04 +01:00 |
|
Tiago Gomes
|
401ad145a5
|
improve the way the factor graph is constructed from a set from factors
|
2012-04-14 17:57:24 +01:00 |
|
Tiago Gomes
|
f6e3bb4481
|
don't assert when suming numbers with negative infinity
|
2012-04-13 23:12:12 +01:00 |
|
Tiago Gomes
|
24a5fe9c23
|
add typedef
|
2012-04-13 15:56:37 +01:00 |
|
Tiago Gomes
|
05ef8610f4
|
fix warning
|
2012-04-13 15:47:41 +01:00 |
|
Tiago Gomes
|
00faccd940
|
implement a printSolverParameters in ground solvers
|
2012-04-13 15:22:24 +01:00 |
|
Tiago Gomes
|
f3be68a552
|
add a way to print bool vars
|
2012-04-13 15:21:11 +01:00 |
|
Tiago Gomes
|
15c8f3abc6
|
ops
|
2012-04-12 18:46:21 +01:00 |
|
Tiago Gomes
|
5348c4a989
|
comment debug information in some prolog files
|
2012-04-12 18:35:29 +01:00 |
|
Vítor Santos Costa
|
5a8cc421d2
|
small pfl fixes.
|
2012-04-12 18:11:29 +01:00 |
|
Vítor Santos Costa
|
c5f42cd7eb
|
more pfl changes.
|
2012-04-12 17:24:39 +01:00 |
|
Vítor Santos Costa
|
8c2dd1f847
|
fix bad call for parameters.
|
2012-04-12 17:17:21 +01:00 |
|
Vítor Santos Costa
|
28ce2da3dc
|
Merge branch 'master' of https://github.com/tacgomes/yap6.3
|
2012-04-12 17:07:19 +01:00 |
|
Tiago Gomes
|
9def6c2b15
|
tempary hack to fix cbp and clean in benchs.sh
|
2012-04-12 00:42:55 +01:00 |
|
Tiago Gomes
|
564958ef8d
|
improvements on benchmarkings
|
2012-04-11 23:48:59 +01:00 |
|
Tiago Gomes
|
03013960d3
|
refactor the city benchmarks and introduce set_solver/1
|
2012-04-11 19:15:52 +01:00 |
|
Tiago Gomes
|
f2fbbf29d8
|
rework the examples and erase the city network in the old format
|
2012-04-11 15:36:50 +01:00 |
|
Tiago Gomes
|
8697fcd2b4
|
refactorings
|
2012-04-10 20:43:08 +01:00 |
|
Tiago Gomes
|
78e86a6330
|
refactor ground solver interface
|
2012-04-10 15:00:18 +01:00 |
|
Tiago Gomes
|
46e6a10625
|
convert city dataset to new format
|
2012-04-10 12:56:14 +01:00 |
|
Tiago Gomes
|
b52dc99914
|
refactorings
|
2012-04-10 12:53:52 +01:00 |
|
Tiago Gomes
|
aa1b2e40ea
|
some renamings
|
2012-04-10 11:51:56 +01:00 |
|
Tiago Gomes
|
6986e8c0d7
|
Improvements
Factor nodes now contain a factor object instead of a pointer. Refactor the way .fg and .uai formats are readed.
|
2012-04-09 15:40:51 +01:00 |
|
Tiago Gomes
|
f1d52c0389
|
add missing files
|
2012-04-05 23:04:27 +01:00 |
|
Tiago Gomes
|
d1b25f0864
|
renamings and delete bn_bp stuff
|
2012-04-05 23:00:48 +01:00 |
|
Tiago Gomes
|
b28ee8fb3a
|
drop bayesian network representation
|
2012-04-05 20:08:54 +01:00 |
|
Tiago Gomes
|
abb0410d07
|
drop suport for Pearl belief propagation
|
2012-04-05 19:34:37 +01:00 |
|
Tiago Gomes
|
0d23591058
|
Add support to markov networks
|
2012-04-05 18:38:56 +01:00 |
|
Vítor Santos Costa
|
bc2364c5dc
|
small fixes
|
2012-04-04 08:29:20 +01:00 |
|
Tiago Gomes
|
6c3add2ebd
|
first steps in adapting horus ground solvers to pfl
|
2012-04-03 19:53:27 +01:00 |
|
Vítor Santos Costa
|
2bdec8f725
|
more PFL fixes.
|
2012-04-03 17:12:58 +01:00 |
|
Vítor Santos Costa
|
14d142aa10
|
new example.
|
2012-04-03 16:23:26 +01:00 |
|
Vítor Santos Costa
|
65e0c3b2a2
|
more PFL changes.
|
2012-04-03 16:22:40 +01:00 |
|
Vítor Santos Costa
|
6ccd458ea5
|
Merge branch 'master' of https://github.com/tacgomes/yap6.3
Conflicts:
packages/CLPBN/clpbn/bp.yap
packages/CLPBN/clpbn/fove.yap
packages/CLPBN/clpbn/horus.yap
|
2012-04-03 15:07:22 +01:00 |
|
Vítor Santos Costa
|
44cb6abcb6
|
PFL support.
|
2012-04-03 15:01:35 +01:00 |
|
Vítor Santos Costa
|
e130c26c6d
|
improve bdd support.
|
2012-04-03 15:01:14 +01:00 |
|
Tiago Gomes
|
911b241ad6
|
fix align of logical variables
|
2012-04-03 11:58:21 +01:00 |
|
Tiago Gomes
|
fd8980642b
|
another test
|
2012-04-01 00:23:03 +01:00 |
|
tgomes
|
c6128c51e8
|
this is a test
|
2012-03-31 23:59:05 +01:00 |
|
Tiago Gomes
|
e9cc1a8be2
|
remove unnecessary files
|
2012-03-31 23:44:08 +01:00 |
|
Tiago Gomes
|
313f9a036a
|
yay, my first commit
|
2012-03-31 23:27:37 +01:00 |
|
tgomes
|
24b466db4e
|
new version.
|
2012-03-29 12:24:29 +01:00 |
|
Vítor Santos Costa
|
0a9076bf4a
|
bdd
|
2012-03-28 10:59:26 +01:00 |
|
Vítor Santos Costa
|
cd45c64dcc
|
allow optimisation and preserve ordering.
|
2012-03-27 14:57:12 +01:00 |
|
Vítor Santos Costa
|
52e5fdb6aa
|
fix typo and export extra
|
2012-03-25 21:42:49 +01:00 |
|
Vítor Santos Costa
|
7d6b2435e0
|
fix typo and export extra
|
2012-03-25 21:42:39 +01:00 |
|
Vítor Santos Costa
|
a38177207d
|
use safer method
|
2012-03-25 21:41:03 +01:00 |
|
Vítor Santos Costa
|
7d6461a527
|
fix order.
|
2012-03-23 22:26:31 +00:00 |
|
Vítor Santos Costa
|
07335ce047
|
clp(bn) support
|
2012-03-22 23:24:09 +00:00 |
|
Vítor Santos Costa
|
6b1574757e
|
fix dist usage.
|
2012-03-22 22:32:50 +00:00 |
|
Vítor Santos Costa
|
a338b95d3f
|
add more support for FOVE.
|
2012-03-22 19:10:15 +00:00 |
|
Vítor Santos Costa
|
7d4f83ca40
|
improve examples.
|
2012-03-22 19:09:31 +00:00 |
|
Vítor Santos Costa
|
172f59cee5
|
ifix interface to clp(bn) machinery.
|
2012-03-22 19:08:36 +00:00 |
|
Vitor Santos Costa
|
c85e76f20f
|
new fove version.
|
2012-03-22 11:40:24 +00:00 |
|
Vitor Santos Costa
|
6191dd210b
|
new version
|
2012-03-22 11:35:54 +00:00 |
|
Vitor Santos Costa
|
21d317b223
|
new version of bp
|
2012-03-22 11:33:24 +00:00 |
|
Vitor Santos Costa
|
6e36498cac
|
new version.
|
2012-03-22 11:29:46 +00:00 |
|
Vítor Santos Costa
|
a25c97c295
|
fove initial skeleton.w
|
2012-01-10 17:01:06 +00:00 |
|
Vítor Santos Costa
|
bf12f320fe
|
fix CPT handling in aggregates.
|
2011-12-27 22:08:21 +00:00 |
|
Vítor Santos Costa
|
8f3eabef1d
|
support parfactors, first step.
|
2011-12-27 22:07:42 +00:00 |
|
Vítor Santos Costa
|
7df0fd90f5
|
Changes by Tiago
|
2011-12-12 15:30:24 +00:00 |
|
Vítor Santos Costa
|
33bf0bc0f5
|
new release from Tiago
|
2011-12-12 15:29:51 +00:00 |
|
Vítor Santos Costa
|
03391e3feb
|
New Version From Tiago
|
2011-12-10 23:12:10 +00:00 |
|
Vítor Santos Costa
|
dbcb6e530c
|
New Version From Tiago
|
2011-12-10 22:58:43 +00:00 |
|
Vítor Santos Costa
|
2f6ec5ff59
|
improve learning for CLP(BN).
|
2011-11-30 13:04:13 +00:00 |
|
Vitor Santos Costa
|
b2dcc47f9c
|
fix evidence problems.
|
2011-09-24 21:38:59 +01:00 |
|
U-WIN-U2045GN0RNQ\Vítor Santos Costa
|
4fe1833ece
|
Merge branch 'master' of /cygdrive/z/vitor/Yap/yap-6.3
|
2011-07-25 17:09:43 +01:00 |
|
U-WIN-U2045GN0RNQ\Vítor Santos Costa
|
840e287cda
|
mode changes
|
2011-07-25 17:09:28 +01:00 |
|
Vitor Santos Costa
|
69e5fed10f
|
new version of belief propagation solver.
|
2011-07-22 21:33:30 +01:00 |
|
Vitor Santos Costa
|
45e5e3b983
|
work if ipackages are missing and some cleanups.
|
2011-07-13 15:31:22 +01:00 |
|
Vitor Santos Costa
|
9727f3c71c
|
fix warning messages.
|
2011-07-04 22:36:34 +01:00 |
|
Vitor Santos Costa
|
f04a153e42
|
flag unavailable before gcc-4.2
|
2011-06-11 23:07:02 +01:00 |
|
U-WIN-ENP104VVO3U\Vítor Santos Costa
|
d685b8891f
|
fix compilation flag.
|
2011-06-06 12:29:28 +01:00 |
|
Vítor Santos Costa
|
b1a3b925ae
|
handle variable destroyed by garbage collector.
|
2011-06-03 12:54:09 +01:00 |
|
Vítor Santos Costa
|
56d71e55b4
|
remove unecesary files.
|
2011-06-03 12:26:10 +01:00 |
|
Vitor Santos Costa
|
e9171547b9
|
implementation of bayes ball.
|
2011-05-27 21:34:55 +01:00 |
|
Vitor Santos Costa
|
b3bd547f55
|
vel -> ve
|
2011-05-21 00:27:25 +01:00 |
|
Vitor Santos Costa
|
55e2e6fe3a
|
small fixes
|
2011-05-20 23:56:12 +01:00 |
|
Vitor Santos Costa
|
6d4d2b5830
|
fix Makefile for bp
|
2011-05-19 09:23:32 +01:00 |
|
Vitor Santos Costa
|
b7379a67cc
|
Update CLP(BN) with Tiago's latest version of BP solver.
|
2011-05-17 12:00:33 +01:00 |
|
Vítor Santos Costa
|
63d8536711
|
move examples upwards.
|
2011-05-01 22:49:34 +01:00 |
|
Vitor Santos Costa
|
f3debd2f49
|
fix modules.y
|
2011-03-24 21:26:01 +00:00 |
|
Vítor Santos Costa
|
e05b84ce4e
|
fix to thread support.
|
2011-03-11 19:49:32 +00:00 |
|
U-WIN-U2045GN0RNQ\Vítor Santos Costa
|
752fa4fc53
|
support windows compilation, upgrade to current uxnt.
|
2011-03-09 00:02:21 +00:00 |
|
U-WIN-U2045GN0RNQ\Vítor Santos Costa
|
a3f79cede9
|
WINDOWS compatibility
|
2011-03-08 00:03:50 +00:00 |
|
Vítor Santos Costa
|
31909e3741
|
fix makefile rules.
fix dtoa for 64 bit machines
|
2011-03-01 09:18:19 +00:00 |
|
Vítor Santos Costa
|
fbdac55317
|
rm Makefile, we have Makefile.in
|
2011-02-25 12:05:51 +00:00 |
|
Vítor Santos Costa
|
11f4ac0e52
|
remove dump files.
|
2011-02-25 12:04:46 +00:00 |
|
Vítor Santos Costa
|
6ea0b727e0
|
delete executable.
|
2011-02-23 15:35:17 +00:00 |
|
Vítor Santos Costa
|
29e46cbab9
|
Experimental code for Tiago Gomes bp solver.
|
2011-02-23 15:31:56 +00:00 |
|
Vitor Santos Costa
|
8690fb8ca0
|
make clp(bn) work again.
|
2010-06-30 17:54:58 +02:00 |
|
Vitor Santos Costa
|
b2eb437625
|
minor changes to CLP(BN).
|
2009-10-21 00:05:23 +01:00 |
|
Vitor Santos Costa
|
307446d000
|
improve evidence handling in CLP(BN).
|
2009-09-09 18:02:09 -05:00 |
|
Vitor Santos Costa
|
a10bf47a0c
|
improve stochastic grammar learning (work in progress).
|
2009-05-26 10:49:04 -05:00 |
|
Vitor Santos Costa
|
6fd5e592d3
|
support probabilistic grammars from CLPBN
|
2009-05-02 14:22:54 -05:00 |
|
Vitor Santos Costa
|
1f7b839e85
|
support exporting top-level-work as absolute path
|
2009-05-02 14:11:54 -05:00 |
|
Vitor Santos Costa
|
4188091d01
|
fix case where we have multiple marginals.
|
2009-03-19 09:52:25 +00:00 |
|
Vitor Santos Costa
|
9c9444bece
|
update package locations to a subdir packages
|
2009-02-16 12:23:29 +00:00 |
|